Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01781 ATGGAGTTAGACGAGTATGAGTTACACGAATATGAAATAGAACATGACCATCATGCAGAGACCGATGTCGACAATCGGGATGGGGTTGAATTGGAAGACAATTTAGACGGCGTCGGAGGAATGTATGACAATTTTGTGGATGATGACTTATACGCTATTGATTCTGGCGAATTGATAGGTTCGATTGATTTTGTGAACTTCAGCGAGGAGGAAGTTCGCCGCTTTAATTTCGTAGATGATGATATTGCGTTTGAGTTCTGCCAGCAATATGCAAAGCACCATGGCTTCGGCGTTAGACATTCCAGGAGTGAAAAATGTGGCGAAGTAAGGATACGACAGGAATTCGTGTGCCACCGACAAGGGTACCGATCACCGAAGTTCTACTCAATTCCTAACTGGCAAAAAAGGCCGAGGGCCGAGACACGGTGGGGATGCCCTACAAGGATGCATGTTCGCATGGACGATAAATCAGGACATTGGTACGTTGTGTACTTTTCAGACGCGCATAAACCACCCCATTCTTGA 525 0.4571 MELDEYELHEYEIEHDHHAETDVDNRDGVELEDNLDGVGGMYDNFVDDDLYAIDSGELIGSIDFVNFSEEEVRRFNFVDDDIAFEFCQQYAKHHGFGVRHSRSEKCGEVRIRQEFVCHRQGYRSPKFYSIPNWQKRPRAETRWGCPTRMHVRMDDKSGHWYVVYFSDAHKPPHS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01781 174 Pfam FAR1 DNA-binding domain 85 169 IPR004330 -
Aip10g01781 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 48 170 - -
Aip10g01781 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01781 Aip-Chr10 42725099 42725623 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01781 FAR1 9.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01781 - K17604 aip:107620767 350.517