Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01758 ATGTCCAGAAACGAGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGGTGAAGACGACGATGTGGATTCGTTGAATTTTACTAGCAAGAGTGAACAAGGTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTCGTTAGGGATAACCAAGGTAGAATCATTTGCAGGCAACTTGTTTGCAATAAGGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTCATGCGAACCAAGTGTCCAGCTTGA 420 0.419 MSRNEDDVKNDSDNDLGDDFDYQPNAEDDGEDDDVDSLNFTSKSEQGCGVKRIADLMVMVEDIWNLEFRTEDEACQFYNAYACWHGFVMRKDDVVRDNQGRIICRQLVCNKEGWRNMRYLDLDDRSREARSLMRTKCPA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01758 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 139 - -
Aip10g01758 139 MobiDBLite consensus disorder prediction 1 41 - -
Aip10g01758 139 MobiDBLite consensus disorder prediction 11 35 - -
Aip10g01758 139 Pfam FAR1 DNA-binding domain 76 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01758 Aip-Chr10 41777582 41778001 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01758 FAR1 3.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01758 - - adu:107460934 236.498