Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01755 ATGGCAAAACCTATACCCAAAATTGGTTCGCGTAAAAATGGACGTATTGGTTCACGTAAACATGCTCGTAAAATACCAAAGGGCGTTATTCATGTTCAAGCTAGTTTCAACAATACCATTGTCACTGTTACCGATGTACGGGGTCGGGTAATTTCGTGGTCCTCCGCAGGTACTTGTGGATTCAAAGGTACGCGAAGGGGAACACCATTTGCCGCCCAAACCGCAGCAGGAAATGTTATTCGAATAGTAGCGAATCAAGGCATGCAATGA 270 0.4481 MAKPIPKIGSRKNGRIGSRKHARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNVIRIVANQGMQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01755 89 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 1 89 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip10g01755 89 Gene3D Ribosomal protein S11 9 89 IPR036967 GO:0003735|GO:0005840|GO:0006412
Aip10g01755 89 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 89 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip10g01755 89 PANTHER 30S RIBOSOMAL PROTEIN S11, CHLOROPLASTIC 1 89 - -
Aip10g01755 89 Pfam Ribosomal protein S11 28 89 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip10g01755 89 MobiDBLite consensus disorder prediction 1 23 - -
Aip10g01755 89 SUPERFAMILY Translational machinery components 23 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01755 Aip-Chr10 41709020 41709289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01755 28 79 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 43.396 2.34e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01755 K02948 - fve:10251554 165.622