Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01751 ATGGGATATAAGAATGATATGATTCAACCTCAAACCCATTTGAATGTAGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAGTATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGTATTATAA 387 0.385 MGYKNDMIQPQTHLNVADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01751 128 ProSitePatterns Ribosomal protein L14 signature. 66 92 IPR019972 -
Aip10g01751 128 Pfam Ribosomal protein L14p/L23e 7 128 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip10g01751 128 Hamap 50S ribosomal protein L14 [rplN]. 7 128 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip10g01751 128 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 7 128 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip10g01751 128 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 7 128 - -
Aip10g01751 128 SUPERFAMILY Ribosomal protein L14 7 128 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip10g01751 128 SMART Ribosomal_L14_2 7 128 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip10g01751 128 Gene3D Ribosomal protein L14 3 128 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip10g01751 128 TIGRFAM rplN_bact: ribosomal protein uL14 7 128 IPR005745 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01751 Aip-Chr10 41697848 41698234 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01751 14 124 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.522 7.12e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01751 K02874 - csin:14412462 226.483