Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01727 ATGGAAGGCGGCGGTCCGAGCCGGCAAGTCGTTGCGGAAGACTTCTTGAGTAGAAATTTTGCTACGGAGGAGGATGCCTATGCTGCCTACAAGGATTTTGCTAGATTAAGGAGTTTTGGCGTTCAGAAGGGAGATGTAGGTTGTGTTAATGGGATTTTGGTAACGAGAAACTTTTTCTGCTATCGACAAGGTATAAGACATCGAAAGCACTATGATCGACCTGAGCGAGTAAGGGAGGAGAGGCTGGAGAGTCGAATGGACTGTAAGGCCAAATTGAAGATTTACTACGATATGCAACAGAGCGTGTGGAAGGTAAGAACCATCATTGACGAACACAACCACGAGCTTGCCCCAGCCATGTTTACACATCTTCTTCCTAGTCATCAGAAGATGAGCGAAGGCAACAGGGCACAGGTGGACAGTTTTAAGCAGTTTGGGATAGCAACCTCCAAAATAATGGCTTACATGGCTGGACAATATGGTGGGTATGGTATGCTTCGATTTACAAAACGAGATTTGTATAATTATGTGCACGGACAAAGGATTACACGAATATGTGATGGGGATGCAGCAGCAACTATTGGTTACTTTGAGGGTAAGGCAAATGCAGACATAATGACAGCGGCACGCTACACACGGACCCCGGATAATCGCCTGGGTAGCCTATTTTGGGCTGATGGCGAGATGATGGCGGATTATCAGCTATTTGGTGATGTGTTGGCGTTTGATTCTATGTATCGTTCTAACAAGTACAGGAAGCCGCTGGTGGTTTTCTCTGGGTCAAATCACCACAAGCAAACATCCAATTTTGAGTTCACGTTGCTGGAGGATGAAGAGGTTCACACTTACCGGTGGTGTTGTTGA 864 0.4618 MEGGGPSRQVVAEDFLSRNFATEEDAYAAYKDFARLRSFGVQKGDVGCVNGILVTRNFFCYRQGIRHRKHYDRPERVREERLESRMDCKAKLKIYYDMQQSVWKVRTIIDEHNHELAPAMFTHLLPSHQKMSEGNRAQVDSFKQFGIATSKIMAYMAGQYGGYGMLRFTKRDLYNYVHGQRITRICDGDAAATIGYFEGKANADIMTAARYTRTPDNRLGSLFWADGEMMADYQLFGDVLAFDSMYRSNKYRKPLVVFSGSNHHKQTSNFEFTLLEDEEVHTYRWCC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01727 287 Pfam MULE transposase domain 239 286 IPR018289 -
Aip10g01727 287 Pfam FAR1 DNA-binding domain 30 118 IPR004330 -
Aip10g01727 287 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 285 IPR031052 GO:0006355
Aip10g01727 287 PANTHER OS02G0262500 PROTEIN 14 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01727 Aip-Chr10 40647317 40648180 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01727 FAR1 1.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01727 - - aip:107607194 469.159