Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01714 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTCCAAGAGAAGAGGGGGTAGATGTTAGAAAGATGATGGGACACAAAAGGAGCCCATGTTCTGTTGACCAAAGCAGTTATACTTCTATTGAATCTAAAAGGCAAAAGGCTAATGATTTATCAATCACCGCAAAGGAGAGGAAGGAGAAGCTTAGTGAACGAATCGTTGCATTGCAGCAGCTTGTTTCACCATATGGCAAGACAGATACATCTTCTGTCTTAGAGGAAGCAATGCAATACATAGGTTTCCTTCATAGACAAGTTAAGGTTTGGACATTCTTTCTAAATTGTTCTGTGTATCTTGGCAATTATTTCATGCACAACATACATGCATGCCATACATTATTAACACCTAAATTAAGCTGTGAAGTGTTTCTGATGTAA 420 0.3857 MIASSFCNADSMFPREEGVDVRKMMGHKRSPCSVDQSSYTSIESKRQKANDLSITAKERKEKLSERIVALQQLVSPYGKTDTSSVLEEAMQYIGFLHRQVKVWTFFLNCSVYLGNYFMHNIHACHTLLTPKLSCEVFLM 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01714 139 CDD bHLH_AtbHLH_like 53 102 IPR045239 -
Aip10g01714 139 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 15 105 - -
Aip10g01714 139 Gene3D - 41 104 IPR036638 GO:0046983
Aip10g01714 139 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 15 105 - -
Aip10g01714 139 SMART finulus 53 102 IPR011598 GO:0046983
Aip10g01714 139 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Aip10g01714 139 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 104 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01714 Aip-Chr10 40136081 40140414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01714 24 102 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 62.025 1.68e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01714 - - vun:114178105 184.496