Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01708 ATGGGAAAGAAGGGTAGTTGGTTTTCTGCAATAAAGAGGGTTTTCACACACCACTCCAAGGAGAAGCAAGTACCTAATGATTCGGAGAACAAAAGCTCGAAAGATAAGAAGAAGAAAGGCCTAGGAAAACTAAGGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTTGGCGACTTTGAAAGAGAGCAACAATTACTATCTGTAAGGCCTCCAACGCCTCTCGAGCAACCAAAACCAGCCCCTGTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCGTCTCCGAAGGCTCCTTCTCCGCGTGCTACCTCTCCCAAAGCTACTTCTTCCAGGGTTGTTCATCACCACAAGGAGGTTGGCTATAGACCGGAACCAACTTTAAGGAACCAACATGCCGCGGCATCTAAGATCCAGGCTGTTTATAGAGGCTATATGGCCAGGAGGAGTTTTAGAGCTCTGAAGGGATTGGTGAGGCTTCAAGGCGTGGTAAGAGGACAGAATGTGAAGAGACAGACGGTTAATGCCATGAAACATATGCAGCTGTTGGTGCGAGTTCAGTCTCAAATTCAGTCTCGAAGGATTCAGATGCTGGAAAATCAGGCGCGATATCAAGCCGAGTTAAGGAATGACAAGGATGTTGCTAGCACCTTGGGCAAATTGACTTCTGAGAATGAAGAATGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGATTACAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATACTCTCATCAGTTATGGAAATCCACTCCGAAATCATCTTCGACGCCGGTGACAGACTTGCGATCCGGCCCATGGTGGTGGAACTGGTTGGAGAGACAAATGCCAGCCTCATCAAATCCACAAGAGAAACAATCCCTCAAGAACTTCCAAATCACACCTCCAAGACCATACTCAGAACAAAAGACTAGTCCTAAACCCGCCTCGACCAGCACCCCTCGGCAGCATCATTTCGCCTTCGACAACATGGACATACCAACGCCAAAATCCACCAAATCAACCATACTCCCATCCTCAAAACCTTCTAGAACTCCACCATACAGAACTCCACAACCACCAATCATGTCAAAGTATTCAAGAGCCTTCGACGTGGCGCTGAAGGACGACGATAGCCTAACAAGTTGTCCACCATTTTCTGTGCCGAATTACATGGCTCCAACTGTTTCTGCCAAGGCCAAAGTTCGCGCCAATAGCAATCCAAGAGAAAGGTTTGGTGGTGTTGGAACTCCAACAAGTGATTCAAAGAGAAGACTCTCATTCCCTTTCACACAAGGTATTGGTTCTTTCAAATGGAATAATAGTAATAATGGTAAAACCAATAAGGATCTTCATGGCTCTAATCACAGGATGCAACTTGATTCTTCTATAGGGAACATGAGTGTGGATTCAACTGTTTCTTTGCCTGCTACCATGGGGAGAAAGCCTTTTACAAGATTTGTGTGA 1554 0.4627 MGKKGSWFSAIKRVFTHHSKEKQVPNDSENKSSKDKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLSVRPPTPLEQPKPAPVVPPRAASPRAPSPRAPSPRAASPKAPSPRATSPKATSSRVVHHHKEVGYRPEPTLRNQHAAASKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAELRNDKDVASTLGKLTSENEEWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQLWKSTPKSSSTPVTDLRSGPWWWNWLERQMPASSNPQEKQSLKNFQITPPRPYSEQKTSPKPASTSTPRQHHFAFDNMDIPTPKSTKSTILPSSKPSRTPPYRTPQPPIMSKYSRAFDVALKDDDSLTSCPPFSVPNYMAPTVSAKAKVRANSNPRERFGGVGTPTSDSKRRLSFPFTQGIGSFKWNNSNNGKTNKDLHGSNHRMQLDSSIGNMSVDSTVSLPATMGRKPFTRFV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01708 517 ProSiteProfiles IQ motif profile. 150 178 IPR000048 GO:0005515
Aip10g01708 517 MobiDBLite consensus disorder prediction 14 36 - -
Aip10g01708 517 MobiDBLite consensus disorder prediction 329 354 - -
Aip10g01708 517 MobiDBLite consensus disorder prediction 329 391 - -
Aip10g01708 517 Pfam IQ calmodulin-binding motif 151 171 IPR000048 GO:0005515
Aip10g01708 517 MobiDBLite consensus disorder prediction 1 56 - -
Aip10g01708 517 MobiDBLite consensus disorder prediction 79 135 - -
Aip10g01708 517 Pfam Protein of unknown function (DUF4005) 366 464 IPR025064 -
Aip10g01708 517 SMART iq_5 149 171 IPR000048 GO:0005515
Aip10g01708 517 MobiDBLite consensus disorder prediction 431 454 - -
Aip10g01708 517 MobiDBLite consensus disorder prediction 363 379 - -
Aip10g01708 517 MobiDBLite consensus disorder prediction 82 115 - -
Aip10g01708 517 PANTHER IQ-DOMAIN 5-RELATED 1 514 - -
Aip10g01708 517 Gene3D - 148 201 - -
Aip10g01708 517 PANTHER IQ-DOMAIN 13 1 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01708 Aip-Chr10 39584786 39589579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01708 1 517 IQD Protein Family AT3G59690 51.163 3.92e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01708 - - lang:109331805 689.108