Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01698 atggaatttggattcttggagagattcaagttcacttggTTCGAAGAAATTGTGGGTGGGACAGAGGCCTGTAAAGCTATCAGTTTGGGATTTAAGACTCCTAGAGATGCTATTCAAGGAACTTACATTAACAAGAAATTCCCATCCACGGCCACCATTTCCATCCAAGGTTGCATTGTTGCTGGTATTTGCCACAGTGCCAAAATGACCAAGATTCGTCGCACCTATCTTCATTTCATTCAGAAATACCAAAGGCAAGGCTTTTCTACCTTTCTGTAG 279 0.3656 MEFGFLERFKFTWFEEIVGGTEACKAISLGFKTPRDAIQGTYINKKFPSTATISIQGCIVAGICHSAKMTKIRRTYLHFIQKYQRQGFSTFL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01698 92 Gene3D - 5 90 - -
Aip10g01698 92 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 18 85 IPR000266 GO:0003735|GO:0005840|GO:0006412
Aip10g01698 92 Pfam Ribosomal_S17 N-terminal 23 59 IPR032440 -
Aip10g01698 92 PANTHER BNAA06G38660D PROTEIN 18 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01698 Aip-Chr10 39159404 39163031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01698 25 85 Cytoplasmic Ribosomal Protein Gene Family AT3G48930 62.500 3.53e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01698 K02949 - gmx:100500186 95.1301