Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01670 ATGTCGGACGCTTTGATCAATGGATTGGCCGGAGCTGGGGGAGGGATCATTTCTCAGCTCATAACATACCCCCTTTTAACTTTAAACACTCGCCAACAAACCGACCGTGATGTAAAGAAAATCAAGAGTAAAGTTGGAACCCTCGAACAAATGTGCCAGGTTGTGAAGGAAGAAGGGTGGGAACGATTGTATGGAGGGTTGATACCATCACTAGTTGGTACTGCTGCATCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAGAGCCGAAGAAGCTGCACTAACACAAAAAAAGATTGGCATCAGTGATGGATCAGTTGGAATGCTATCCTCTCTTTTTATTGCTGCTTTATCTGGGTCTCTTAATGTGCTTTTGACGAATCCTATATGGGTTGTTGTCACCCGTATGCAGACACAAAGAAAAGAGTCAAATAAGAAAGATCCTGACCTGGGATTGTTAATTGTTGGTGGTGAAGAAAGCGTTCCTCTTCCTGCAGATAAGCCTCTTCCATATGACACTAAACATGTGGTAGAAGTCTATGAAGAAGGTGGAATCCTTGGTTTCTGGAATGGTGTGTTACCATCATTGATCATGGTATGCAACCCTTCCATTCAGTTCATGCTGTATGAAACCATGTTATTAAAGATGAAAAGAAGACCTTATGGGAATAAGAAGGGTAGAAATGGGGTAACTGCATTTGAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTGTTGTAATTTATCCTCTTCTAGTTCTCAAGTCAAGGCTTCAAGCTAAACAGGATAAAACAGGGGACAACAGGCACCATTATACAGGCACATGGGATGCAATTGTTAAGATGATAAACTATGAAGGGATCTATGGATTCTACAAAGGCATGGGCACTAAAATTGTACAAAGTGTTCTAGCTGCTGCTGTTTTGTTCATGATGAAGGAAGAACTCGTTAAAGGCGTTCAATCCTTTCTAGCTAAAGATGGATCTAACGCTGTAAAGCGAAAAGAATGA 1026 0.4094 MSDALINGLAGAGGGIISQLITYPLLTLNTRQQTDRDVKKIKSKVGTLEQMCQVVKEEGWERLYGGLIPSLVGTAASQGVYYYFYQIFRNRAEEAALTQKKIGISDGSVGMLSSLFIAALSGSLNVLLTNPIWVVVTRMQTQRKESNKKDPDLGLLIVGGEESVPLPADKPLPYDTKHVVEVYEEGGILGFWNGVLPSLIMVCNPSIQFMLYETMLLKMKRRPYGNKKGRNGVTAFEIFLLGALAKLGATVVIYPLLVLKSRLQAKQDKTGDNRHHYTGTWDAIVKMINYEGIYGFYKGMGTKIVQSVLAAAVLFMMKEELVKGVQSFLAKDGSNAVKRKE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01670 341 Gene3D Mitochondrial carrier domain 95 326 IPR023395 -
Aip10g01670 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 340 IPR044712 GO:0006862|GO:0055085
Aip10g01670 341 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 340 - -
Aip10g01670 341 SUPERFAMILY Mitochondrial carrier 3 320 IPR023395 -
Aip10g01670 341 Pfam Mitochondrial carrier protein 234 323 IPR018108 -
Aip10g01670 341 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Aip10g01670 341 Pfam Mitochondrial carrier protein 109 216 IPR018108 -
Aip10g01670 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 218 IPR018108 -
Aip10g01670 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Aip10g01670 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 324 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01670 Aip-Chr10 38298501 38303088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01670 53 340 Chloroplast and Mitochondria Gene Families AT1G25380 24.653 2.08e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01670 K13354 - gmx:100775784 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01670 10 38298501 38303088 Aip10g01670 10 38298501 38303088 ECH