Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01669 ATGATGAAGAAGAACAATAGTGCCGAAGAAGAACTACGAGATCTGACTGAAACTGCGATTGAGATCTTGTTTCAACTTGATCTCTCAGAAAATCAGATCAAGAAGCTAATCAACAATGAGTGCCTTCAGTTCCTTGAATCGTTGCTGCAAGCGTTGAAGCTTGGGAGCTGCCAATCAAGAGCGTACGCAACACTGCTTTTGAAATCGGCATTTACGGCTCATAAGGCGGCATTGAAGCTGGTGGTTGAGCTCTATCCATGGGAAAGAAACAGAATCAAAGTAGTGGAAGCTGGCGTGATGTCCGTGATCGTCAAAGTGCTTCTTGATTCAAAAGAAAGAAGAACGTGTGAGCTGTCGTTAATGGCGTTGGATCAATTTTGCGGTTGCGCAGAAGCATTTCTGAAGGCAGACTCTGAAGCTTTGAGTTTGCTACCAACCTCTTCGCTTTCTTTCACCCAAGTGGCAGCTTTCCTATTGATGCTGAGAGTTTCAACCTCACAAAGTTTCACAGTGGATTCTAACTTGTCCTTCTTCTCATATAGGGCTTTCAGTTTCAGCTCCAAGTCATTGATTTCATTTGACATTCCATTGATCTTTTCTTTTCTTTTGGAAATTGAAGAATAA 624 0.4231 MMKKNNSAEEELRDLTETAIEILFQLDLSENQIKKLINNECLQFLESLLQALKLGSCQSRAYATLLLKSAFTAHKAALKLVVELYPWERNRIKVVEAGVMSVIVKVLLDSKERRTCELSLMALDQFCGCAEAFLKADSEALSLLPTSSLSFTQVAAFLLMLRVSTSQSFTVDSNLSFFSYRAFSFSSKSLISFDIPLIFSFLLEIEE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01669 207 ProSiteProfiles Leucine-rich repeat profile. 22 43 IPR001611 GO:0005515
Aip10g01669 207 PANTHER WDSAM1 PROTEIN 73 155 IPR045185 GO:0061630
Aip10g01669 207 SUPERFAMILY ARM repeat 14 137 IPR016024 -
Aip10g01669 207 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 73 155 - -
Aip10g01669 207 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 16 72 - -
Aip10g01669 207 PANTHER WDSAM1 PROTEIN 16 72 IPR045185 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01669 7 132 U-box Gene Family AT2G35930 35.220 1.41e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01669 - - gmx:100786877 146.362