Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01666 ATGCCTTCTTCGTCTACACCAATTACTATAATCTCAAGATGCACCGTTGTCCCTCACAAACCCTCAACACTCAACGACCTCAAGCTTTCAATCTCAGACCTCAACATGCTCTCTTGTCACTACATCCAAAAGGGATGTATCTACGCTGCACCCTCACTCCCTCAAACCACTCTAATCCAATCCCTTAAAACCTCACTCTCACAAACCCTCTCCATCTTTCCTCCCCTCGCCGGAACCTTCCGAACCTCAGGTTCCGGCCATGTCTACGTCCATTCTAATGACTCCGGCGTCCATTTCATCCACGCCGCGGCTTCTGCAGTTTCTGTCTCCGACCTCTTGTCCTCAAAGGACGTCCCCAACACCTTCCAACAACTCTTCCCCTTCCACAAGAAACTAAACTACACCGCTCATTTCTCTCCGATCATGGCCGTTCAGGTCACCGAGCTCGCCGATGGTGTCTTCATCGGCGTCGCCGTCAACCATGCCGTCACCGACGGAGCCTCCCTCTGGCACTTCTTCAACACCTTCGCTGAATTCTCCAGGGGAGCCGCATCGCCGTCGAGGCTCCCGGACTTCCGCCGGGACTCAATTCTGGTCTCCGAAGCCGTCCTCCGGCTCCCGGACGGCGACCTTAAGGTCTCCTTCAATGCCAACGAGCCCTTGCGCGAGAGGATCTTCGGCTTCAGCCGTGAATCCATTCGGAGGCTGAAAGCAGAAGCAAATCGCCGCGCACCGCCGGAGAATCAAATCTGCAGCGAAGACGGCTGCTCCGCCGTTGAGTTGATGGCGAAGATGAGCAACGACACGAAATTGAAAACGGTTGCTGAAAACAAACCACATAGTGAAATCGTTGAGATCTCGTCCTTTCAGTCCCTCTGCGCGCTGACTTGGCGTGCCGTTACGCGCGCGAGGAAGATTCCGTTATCCAAAACGACGACGTTTAGAATGGCGGTTAACGTTCGCAGCAGAATGGAGCCGAAGCTTGGGGATAACTACTTTGGGAACGCGATTCAGAGCTTTGCCACGTGTGCGACCGCGGAAGAAGTAGTGTGCAGGGACCTTTCGTGGAGCGCAAAGCAGCTGAACAAGAGCGTGAGGGCGTACGATAGCGATGCGGTGAAGCGCGCCATAGAGGATTGGGAGTGCGAGCCACAGTGCTTCGCTTTGGGGAACCACGACGGCGCCACGGTGCAGATGGGGAGCTCTCCGCGGTTTCCTATGTACGATAATGATTTCGGGTGGGGGAAACCAGTGGCTGTGAGGAGCGGCGCCGCCAATAAGTTCGACGGAAAGATGTCGGCGTTTCCTGGGAGGGATGGCGGCGGTTCCGTGGACTTGGAGGTGGTCTTGGCGCCCGATGCTATGGCGGCTCTTGAGTGTGACGACGAGTTCATGCTCTATGCATCTGGGTGA 1413 0.5577 MPSSSTPITIISRCTVVPHKPSTLNDLKLSISDLNMLSCHYIQKGCIYAAPSLPQTTLIQSLKTSLSQTLSIFPPLAGTFRTSGSGHVYVHSNDSGVHFIHAAASAVSVSDLLSSKDVPNTFQQLFPFHKKLNYTAHFSPIMAVQVTELADGVFIGVAVNHAVTDGASLWHFFNTFAEFSRGAASPSRLPDFRRDSILVSEAVLRLPDGDLKVSFNANEPLRERIFGFSRESIRRLKAEANRRAPPENQICSEDGCSAVELMAKMSNDTKLKTVAENKPHSEIVEISSFQSLCALTWRAVTRARKIPLSKTTTFRMAVNVRSRMEPKLGDNYFGNAIQSFATCATAEEVVCRDLSWSAKQLNKSVRAYDSDAVKRAIEDWECEPQCFALGNHDGATVQMGSSPRFPMYDNDFGWGKPVAVRSGAANKFDGKMSAFPGRDGGGSVDLEVVLAPDAMAALECDDEFMLYASG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01666 470 Gene3D - 212 460 IPR023213 -
Aip10g01666 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 468 - -
Aip10g01666 470 Gene3D - 8 205 IPR023213 -
Aip10g01666 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 468 - -
Aip10g01666 470 SUPERFAMILY CoA-dependent acyltransferases 47 187 - -
Aip10g01666 470 Pfam Transferase family 7 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01666 Aip-Chr10 37888423 37889851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01666 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.716 9.57e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01666 - - gmx:100792476 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00907 07 10699532 10701286 Aip10g01666 10 37888423 37889851 ECH
Aip10g01666 10 37888423 37889851 Aip10g01666 10 37888423 37889851 ECH
Aip07g00907 07 10699532 10701286 Aip10g01666 10 37888423 37889851 PCT