Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01664 ATGGACGTGATAAAGACGCAGCAGATATCGTCTCGGGCGATAGAGAAGGTTATAGTGCACCCACTGGTGCTGCTGAGCATCGTCGACAACTACAACAGAGTCGCCAAAGACACTCGCAAACGCGTCGTCGGCGTTCTTCTCGGCTCCACCCTCAAGGGCACCGTCGACGTCACCAACAGCTATGCCGTGCCCTTTGAAGAAGATGACAAGGATCCTAGCATCTGGTTCCTTGACCATAATTATCATGAATCAATGTTTTCTATGTTTAAGAGAATAAACGGTATGCATTTGGCGAATTTGGTACATATTTCCTTTTCATGTATCCTTCTTTCATATGCACATATCTCATCTAATAAAAAATTGATTTTCTATGTTCCCAATCCTGTTTTGGTTATAATTGATGTGGAACCTAAGGAGCTTGGAATTCCAACAAAAGCTTACTATGCAGTTGAAGAGGTTAAAGAGAATGCCACTCAGAAAAGCCAAAAGGTCTTTGTTCATGTACCATCTGAGATTGCTGCTCATGAGGTTGAGGAGATAGGAGTAGAACACTTGCTTAGAGATGTGAAGGATACAACAATTAGCACCCTCGCAACAGAGGTGAGTGGAAAACTCACAGCCTTGAAGGGTCTGGATGCAAGACTTAAAGAGATAAGGAGTTACCTTGACCTTGTCATTGATGGAAAGCTTCCATTGAACCACGAAATCCTGTACCATTTGCAGGATGTGTTCAACCTGCTACCAAATCTTAATGTCTCCGATCTGATCAAGGCTTTTGCAGTGAAAACCAATGATATGATGCTGGTAATTTACCTCTCATCCCTCATCAGAAGTGTAATTGCACTCCACAATTTGATAAATAACAAGATGCTTAACAAAGAACATGAGAGGACAGAAGACTCCAAATCAGTACCAGTACCAAGTGCAGCTGCAAGTTAG 939 0.4249 MDVIKTQQISSRAIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSTLKGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINGMHLANLVHISFSCILLSYAHISSNKKLIFYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERTEDSKSVPVPSAAAS 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01664 312 Gene3D Cytidine Deaminase, domain 2 9 196 - -
Aip10g01664 312 ProSiteProfiles MPN domain profile. 17 156 IPR037518 -
Aip10g01664 312 CDD MPN_RPN7_8 15 297 IPR033858 GO:0005838
Aip10g01664 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 311 - -
Aip10g01664 312 Pfam Maintenance of mitochondrial structure and function 176 287 IPR024969 -
Aip10g01664 312 PANTHER 26S PROTEASOME REGULATORY PARTICLE NON-ATPASE SUBUNIT 8 1 311 - -
Aip10g01664 312 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 13 94 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aip10g01664 312 SMART pad1_6 16 152 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip10g01664 Aip-Chr10 37348686 37351446 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01664 19 250 Eukaryotic Initiation Factors Gene Family AT2G39990 27.459 3.53e-16 75.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01664 K03038 - gmx:100790393 506.908