Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01662 ATGGAAGAAAGCATGTCAGGCTTTTGCATAAGCGACGGAAGAGGAAGTGTTGCTAATAACAATAATAGTGGCGGAAGTGGAACAAAGTGTGGGCGTTGGAACCCAACAACCGAACAAGTGAAGGTTCTGACAGAACTTTTCAGCTCTGGACTCAGAACTCCAAGCACCGATCAGATTCAGAGGATCTCTAATCAGCTCAGTTTCTATGGCAAGATTGAAAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAGGCTAGGGAGAGACAGAAAAGAAGGCGGCTTTCTTTTGATCATGATCATGGAGGTGGTGGAGTTGGAGATAATCATAGCACCATCAATATTAATCATTCTTCGACACAAAGTTTTGCACAGCTGTATTCAGAATCAGAGAAGGTGATTGAGACTCTTCAACTATTCCCATTGAACTCCTTTGGTGAATCAGAATCATCAGAGAAGCTGAGTAGTAGGGTGCATGCAAATGATCAATGCCGGGATAATAATAATTTGATGTTCTCTTACACCATGGGGGAACAAATTGATCACCCTCCATTAGACCTTCGCTTAAGTTTCATGTAA 579 0.4162 MEESMSGFCISDGRGSVANNNNSGGSGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQRISNQLSFYGKIESKNVFYWFQNHKARERQKRRRLSFDHDHGGGGVGDNHSTININHSSTQSFAQLYSESEKVIETLQLFPLNSFGESESSEKLSSRVHANDQCRDNNNLMFSYTMGEQIDHPPLDLRLSFM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01662 192 CDD homeodomain 32 92 IPR001356 GO:0003677
Aip10g01662 192 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 180 IPR044555 GO:0003700|GO:0099402
Aip10g01662 192 Gene3D - 29 97 - -
Aip10g01662 192 SUPERFAMILY Homeodomain-like 31 93 IPR009057 -
Aip10g01662 192 SMART HOX_1 28 95 IPR001356 GO:0003677
Aip10g01662 192 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 180 - -
Aip10g01662 192 MobiDBLite consensus disorder prediction 13 33 - -
Aip10g01662 192 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Aip10g01662 192 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Aip10g01662 192 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01662 Aip-Chr10 37304285 37305621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01662 14 192 Wox Gene Family AT3G11260 55.556 5.03e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip10g01662 Homeodomain 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01662 - - adu:107469676 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01662 10 37304285 37305621 Aip10g01662 10 37304285 37305621 ECH
Aip10g01662 10 37304285 37305621 Aip07g00904 07 10678998 10679799 PCT