Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01658 ATGCTGCCGCCTCTGCTCGCTTCGCACGAGCCCCTTCGGCGCTGCTTGCATCGCGTTGCTCCCTTCGTCACCATCGTCGCAGAGCCCTCTCCGCCGCTCTCGTCGCGCGTCTGCTCCCTTCATCGCCGTTGTCGCAGTGCTCTCTTCGCCACACAGGTCTATGGCGAAGGACCTGCTAGGCCTACTGGAGGAGCTGCTGCTATTGCCATGCTTGTTGGTCCTGATGCTCCCATTGCATTTGAAAGCAAATTGAGGGCAAGCCACATGTCTCATGCTTATGATTTTTACAAGCCTAATCTTACTAGTACTCTTATAGTGATAGTGGTTGCAGTAGTTAGTGCAGTGATTGTTTTGGTAGTTGGAATAGCTATTGGGGTCTATATAAGGAAAGATAGATACATTCAAAGAAAAAGAAGAGGTTCAAATGATGCAGAGAAGTTGGCTAAGACACTTCACCGCAACAGTTTAAATTTCAAGTACTCTATACTGGAGAAGGCTACCAACTCTTTCAACGAAGAAAACAAGCTTGGACAAAGAGGATTTGGATCGGGTGTTCTGCCTGATGAAAGAAAAATTGCCATCAAGAGGTTGTACTTCAACAACAGGCATAGAGCAGCAGATTTCAACAATGAAATCAACATAATTAGTAGCGTGGAGCATAAGAATCTTGTGAGGGGTTACATGGCTCCAGAGTACCTCACTCATGGTCAGTTAACAGAAAAGGCAGATGTATATAATTTTGGTGTGTTAGTCTTAGAAATAGTTACTGAGAGACAGAATAACAGAAGCAAATCAACAGAATACTCAAACAGTATAGTTATACTGACATGGAGGCGTTTCCAATTAGGGACAGCAGAAGAGCTATTTGATCCAAATCTAGTTTCTGATAACAATAATATTAATAAAAAAGATGAGATTTTAAGAGTGGTGCACATGGGACTTCTATGCACACAAGAGAACCCTTCCTTGAGGCCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATATTGCACGTCCCTCTAATCCACCATTCACAAATGAGAACACAATGGAACTCAATGACATTGTTGATAACCCATTTTGCCCTTTCAATAATTTGCAAGCAGTATCTTCCAAATAA 1134 0.4303 MLPPLLASHEPLRRCLHRVAPFVTIVAEPSPPLSSRVCSLHRRCRSALFATQVYGEGPARPTGGAAAIAMLVGPDAPIAFESKLRASHMSHAYDFYKPNLTSTLIVIVVAVVSAVIVLVVGIAIGVYIRKDRYIQRKRRGSNDAEKLAKTLHRNSLNFKYSILEKATNSFNEENKLGQRGFGSGVLPDERKIAIKRLYFNNRHRAADFNNEINIISSVEHKNLVRGYMAPEYLTHGQLTEKADVYNFGVLVLEIVTERQNNRSKSTEYSNSIVILTWRRFQLGTAEELFDPNLVSDNNNINKKDEILRVVHMGLLCTQENPSLRPTMSRALQMLTKKEENIARPSNPPFTNENTMELNDIVDNPFCPFNNLQAVSSK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01658 377 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 78 131 IPR013746 GO:0004421|GO:0006084|GO:0010142
Aip10g01658 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 226 366 - -
Aip10g01658 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 225 - -
Aip10g01658 377 Gene3D - 45 133 IPR016039 GO:0016746
Aip10g01658 377 Pfam Protein tyrosine and serine/threonine kinase 227 332 IPR001245 GO:0004672|GO:0006468
Aip10g01658 377 Gene3D Phosphorylase Kinase; domain 1 134 226 - -
Aip10g01658 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 226 366 - -
Aip10g01658 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 92 225 - -
Aip10g01658 377 Gene3D Transferase(Phosphotransferase) domain 1 227 345 - -
Aip10g01658 377 SUPERFAMILY Protein kinase-like (PK-like) 166 343 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01658 Aip-Chr10 36954539 36957398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01658 205 375 Receptor kinase-like Gene Family AT1G70520 52.023 2.19e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g01658 PK_Tyr_Ser-Thr 2.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01658 - - aip:107631343 267.314