Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01648 ATGCTTCTCCTCATCGTTTATGGGTTGTCACCTCTCCTGCTTCTGCTGTCACGCCATCGTCTGCCCTTCTGGACTTTGCTGCTTTTGAATCACACCCTGTCACTGGTTCTCTGCCTCCTTCTTGTGGCCCAACCTCTAATTAGACTCAACAAAAACAAAGGGGAAGCATTGGAAGCTGGGAAGAGTTACTATGGAAGGTTGCTGAATTATAAGAAGGATGGAATGCCCTTCTGGAACCTACTTACAATTTCACCCATCAAGGACGAAGACGGCAAAGTCTTCAAATTCATCGGGTAA 297 0.4646 MLLLIVYGLSPLLLLLSRHRLPFWTLLLLNHTLSLVLCLLLVAQPLIRLNKNKGEALEAGKSYYGRLLNYKKDGMPFWNLLTISPIKDEDGKVFKFIG 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01648 98 SUPERFAMILY PYP-like sensor domain (PAS domain) 52 98 IPR035965 -
Aip10g01648 98 Gene3D PAS domain 48 98 - -
Aip10g01648 98 ProSiteProfiles PAC domain profile. 61 98 IPR000700 -
Aip10g01648 98 PANTHER PHOTOTROPIN-1 55 98 - -
Aip10g01648 98 PANTHER FLIPPASE KINASE 1-RELATED 55 98 - -
Aip10g01648 98 Pfam PAS domain 50 97 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01648 Aip-Chr10 35548418 35549268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01648 55 98 AGC Kinase Gene Family AT3G45780 75.000 4.21e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01648 K20715 - ahf:114925890 93.2041