Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01617 ATGCCGGTGGACGAAAATGTTGTTCCTGGACTTTACTCTCTACATTTGGGGACTGCGGAGGACACCCAGTCTGAGATGAATGGTAGTCCTAGTGAAGGAGTTGGGGAAGGTGGGGGTGATGCTGGTGGGACATATGTCGATCCGAAATGGCAATTTACTGACGATAATAATAGCTTTGAGGATGATGATGAGGATGACATGGTTCAACATGGAGATGTTGCCGGGTTGAGCGTGGCTGATTTACTAAAAAAGGCTTGGGATAGTGTTGATGATGCCTATGAAACTTACCGCAAATATGGAAGATGTCATGGATTTGGGGTGCGGAAGGGTGATTCTGGCAAAGATTGTGATGGAAAGTTGGTGAGATATCGGTTTTTCTGCAATAGGGAAGGACTGAGAGAGACTAAACACTACAATAGAATAGACAGAAGGAGGATGCACAAACCAGAGACCCGAACTGGCTGCCAAGCAAAGTTGTCGGTGTACTTGGACGAGAATGAGAATAACTGGAAGGTAAGGAAAGTAGTGATGGAGCACAATCATGAATTGGCACCTGTTGGGATGGTACACTTGTTAGCGAGTCACCGTGAATTAAATGAGGCAGCTAATTAA 612 0.4542 MPVDENVVPGLYSLHLGTAEDTQSEMNGSPSEGVGEGGGDAGGTYVDPKWQFTDDNNSFEDDDEDDMVQHGDVAGLSVADLLKKAWDSVDDAYETYRKYGRCHGFGVRKGDSGKDCDGKLVRYRFFCNREGLRETKHYNRIDRRRMHKPETRTGCQAKLSVYLDENENNWKVRKVVMEHNHELAPVGMVHLLASHRELNEAAN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01617 203 MobiDBLite consensus disorder prediction 1 60 - -
Aip10g01617 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 68 190 - -
Aip10g01617 203 Pfam FAR1 DNA-binding domain 96 185 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01617 Aip-Chr10 33215082 33216012 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01617 FAR1 8.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01617 - - aip:107620502 385.571