Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01600 ATGGCAAAATACTATGATATTGATGATATTATCACAGAGGAAGAGATTGTGTCAGTTATATTTCAGAAGCCAGCATCTGGAGTGGGGATAGATCCCAGTTCTGAAACAGACTTTATTGAAACAGGTTCAAAAGTTGAACTGCCTTTTTGGCTTGCTCATGAACTACAGTTGAGACAAGCAGTATCAGTCCATGTTCCTCCTTGTTTCAATCAAAAAACAAGGTTAGAGATCCAGGCTGATTCTGCAAGTGTGGATTTGAGGTCTAGATGTCCATTCTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTAGTGATAGAACCATTGGGTTTCTGTTGTTGTCGGCATTCAAGAGTAGGTACAAGGAAGTTCTCACCAAGGCACATACTACAGCATTTGCAGCTGGTTCCAAATTCTGGACTATTTTGACAAAAGAAGAGATCAGTTTGTACGAGGCAGCTCAATCTGCAATGGTATCCTTCAAGAAGTGGCGAAGGGGCGGACCTAGATTCCAGATAGCTTCAATTCTGGCAAGAAAGAGAAAATCAACTGACTAG 558 0.4104 MAKYYDIDDIITEEEIVSVIFQKPASGVGIDPSSETDFIETGSKVELPFWLAHELQLRQAVSVHVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVSDRTIGFLLLSAFKSRYKEVLTKAHTTAFAAGSKFWTILTKEEISLYEAAQSAMVSFKKWRRGGPRFQIASILARKRKSTD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01600 185 Pfam GINS complex protein 45 147 IPR021151 -
Aip10g01600 185 SUPERFAMILY PriA/YqbF domain 2 66 - -
Aip10g01600 185 CDD GINS_A_psf3 61 167 - -
Aip10g01600 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
Aip10g01600 185 Gene3D - 1 167 IPR038437 -
Aip10g01600 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01600 1 185 Core DNA Replication Machinery Family AT3G55490 68.649 5.74e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01600 K10734 - gmx:100799874 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01600 10 32317653 32320498 Aip10g01600 10 32317653 32320498 ECH