Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01598 ATGGCATCCAGAGCCACTGGAACACTGATTTGTTCTTGCATGATATGGCTCTTCCTTCTCTGCGCAACCATCGCGTTCCTTCAGCTCAAGTTGGTGGATGACTCAGCACATCGAGCTTCCTCTAATAGAAAAATAACCACTCATCACTCCGCAACTGGTGACCTAGATGGAGAAAATTTGGAGGGTGTGACGCATAAGGTGTATTTTGATGTTCAGATTGGTGGAAAATTAGCGGGTCGCATAGTCATGGGCCTTTTTGGGAAGACAGTTCCGAAAACTGTAGAAAACTTCAGAGCGCTTTGCACCGGAGAGAAGGGGGTTGGAAAAAGTGGGAAGCCTCTTCACTATAAAGGGAGCGTATTCCATCGGATTATACCAAGCTTTATGGTCCAAGGTGGTGATTTCACACGAGGTGATGGACGAGGTGGTGAATCGATCTATGGTGATAAGTTTGCTGATGAAAACTTCAAGGTGAAGCATGATGGGCCAGGGTACTTGTCAATGGCGAATTCCGGGCAAGATACCAATGGCTCGCAGTTTTTCATCACAACAGTTGGATGGACGCCATGTTGTATTTGGCAAGGTACTTTCAGGAATAGACATTTTGTACAAGATTGA 618 0.4579 MASRATGTLICSCMIWLFLLCATIAFLQLKLVDDSAHRASSNRKITTHHSATGDLDGENLEGVTHKVYFDVQIGGKLAGRIVMGLFGKTVPKTVENFRALCTGEKGVGKSGKPLHYKGSVFHRIIPSFMVQGGDFTRGDGRGGESIYGDKFADENFKVKHDGPGYLSMANSGQDTNGSQFFITTVGWTPCCIWQGTFRNRHFVQD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01598 205 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 68 205 IPR002130 GO:0000413|GO:0003755
Aip10g01598 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 IPR002130 GO:0000413|GO:0003755
Aip10g01598 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Aip10g01598 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 164 179 IPR002130 GO:0000413|GO:0003755
Aip10g01598 205 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 191 IPR002130 GO:0000413|GO:0003755
Aip10g01598 205 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 43 185 - -
Aip10g01598 205 Gene3D - 51 196 IPR029000 -
Aip10g01598 205 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 185 IPR002130 GO:0000413|GO:0003755
Aip10g01598 205 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 116 133 IPR020892 GO:0003755|GO:0006457
Aip10g01598 205 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 43 185 - -
Aip10g01598 205 SUPERFAMILY Cyclophilin-like 63 186 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01598 Aip-Chr10 32295462 32299992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01598 79 182 U-box Gene Family AT5G67530 49.524 1.26e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01598 K01802 - gmx:100798499 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01598 10 32295462 32299992 Aip10g01598 10 32295462 32299992 ECH