Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01589 ATGCAGGATTGGAAGAGGGAGCATAAGGTTGTTACCCGCTGTGGATGTCAGGCAGAGATGAGGATAAAGCGAAAAGCCGAAAGTAGCAATTGGTATGTGTGTCGTTTTGTTGATGAGCATAACCACGAACTTCTCCCGGCAAAGTTTGTGTCATACTTGCCAGCATATAGGAAAATATCAGATGTTGATAGAGCCCACATAGACAGTTTGAGGCGGCAACGTGCAATGCAAAGCGGTGATGTGAATGCCGTGTTACAATATTTCAATGTATGTGCAAGGAGAGATGGTAATATGTATTGGCGGTACCAGGTTGGGGCTGAGCAAAATATGTGTGATCTGTTTTGGAGCGACGGGCGTAGTCAGGATGATTACAAGATATTTGGTGATGTTTTGGCGTTTGATGCGACCTACGGGCGAAACAAGTACAATCTGCCGGTGATAGTATTCTCCGGGGTGAACCACCATAACCAGACCTGTGTCTTTGGCGCAGCCATGGTGTCTTTGGAAACACAAGCGTCGTATGTGTGGGTATTGAGCAAGTTTTTANNNATCGTTGATGGGGACAGGTCAATACGGTTTGCCATTCAGGAAGTATTTCTAGAAGCTCATCACAGGCTCTGTGCGTGA 627 0.4593 MQDWKREHKVVTRCGCQAEMRIKRKAESSNWYVCRFVDEHNHELLPAKFVSYLPAYRKISDVDRAHIDSLRRQRAMQSGDVNAVLQYFNVCARRDGNMYWRYQVGAEQNMCDLFWSDGRSQDDYKIFGDVLAFDATYGRNKYNLPVIVFSGVNHHNQTCVFGAAMVSLETQASYVWVLSKFLXIVDGDRSIRFAIQEVFLEAHHRLCA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01589 208 Pfam FAR1 DNA-binding domain 5 46 IPR004330 -
Aip10g01589 208 Pfam MULE transposase domain 130 207 IPR018289 -
Aip10g01589 208 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 207 IPR031052 GO:0006355
Aip10g01589 208 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 70 IPR031052 GO:0006355
Aip10g01589 208 PANTHER OS02G0262500 PROTEIN 74 207 - -
Aip10g01589 208 PANTHER OS02G0262500 PROTEIN 5 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01589 Aip-Chr10 32085265 32085996 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01589 MULE 4.4e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01589 - - ahf:112763993 358.607