Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01585 ATGACACCACTTTCCTCCTCCGAAATCCTTCGTCTCTCCGCCGCGGTGATATTCACGCTCTCTCTACTGATTCCCACTTCCCATGCTCTCGGCTCCGGCGCTACCCTTGCCGTCACCGACGCCTCCGACACCGTCTGCGGCGTCGTCGCCGGGGAATCCACCCAACGCATTGAGTGCTCCCGCCTCGGTAGTCAGCTTGTCCCCGCCGTTCCCCCTAACATCTCATTCTCCACCGTCTCCGGCGGCGCCACCTTCTTCTGCGGCCTCAGGTCCGGCAACCGCACCTTGCTCTGTTGGAACACCATCACCACCACCAACGGAACCTTCACACCAAAGAGACTCTACAACAACGACACTGTTCTATTGGAGAATCTCGCCGTCGGAGAAACCCACGTTTGCGCCACCGTGGTCGGCGCCGGAACCGTTACGTGCTGGAGAACCAGCAAAACGTTCAAGTCCCCATCTAGGTCTCTTCAATTCTCTTCAATCTCATCTGGGTCAGGATTCTCTTGCGGGATTCTGAAGAACAGTTCTCAAGTTCGATGTTGGGGTGAAACGGTAATTTCAAGAGTGATTGAAAATGGGTTTAAGAACATGTCTATGTGGAGCATTGTCGCTGGTGGTTCACACGTTTGTGGGTTGAATTCAACTGGATTTCTGGTTTGTATAGGGAACAACGACAATTTTGGGCAACTTGATGTTCCAAAAAATGAAGCTTGGGAATTTGGTGAATTAGCACTTGGTGCTAGCCATGGATGTGCTTTGAGAAAGTTGAATGGAACTGGAAGCGTTGTTTGTTGGGGTGGTGATGGTAATTTCACATCGGAAGTAACAAAAGGTGTTTCCTTCGAGGTAATTGTTTCTGGGTCTAACTTCACTTGTGGATTAGTGACACGTAATCTTAGTGTTCTTTGTTGGGGTCCTGGTTGGCCTAATAATAATGGTTCAAGATTTGAACTTCCATTGCCTAGTGTTCTTCCGGGTCCTTGTGTTCAATCCTCTTGTGATAGTTGTGGTCCATATCCTGATTCTCAATCTCTGTGTTCCGATTCTGATAGCAACATTTGCAAGCCTTGTTGGCCTCCAATTCAAGCTCCAGCAGCGGCAATGGTTCCATCTTCGCTGCCACCGGGGCCTGCTCCTCGGCAGAGGTCGCGGTCGAGGACATTGACTAGGGGTTTATTGGCATTTGCTATTGTTGGATCAGTTGGTGCTGTTGCTGGAATTTGCACAATTGTTTATTGTTTGTGGAATGGTGTTTGTTTTGGGAAGAAGAAAGTGCACAATTCTGTGCAGCCAACAATCACAAGAGGTAGTAGTACTTCAAGTGGTGTTTCCAACAATAGTAGGAACAATAGCAGGCCTCTTTCGAGGACTTCCACAATTATGCGACAAGGTTCGAGGATAATGCGGCGCCAGAGGAGTGGCACCTCATCCACAAAACACCCTGATAGGGCTGAGGAATTCGCCTTGGCCGAGCTAATAGCTGCAACGGACAATTTCTCGCCTGAGAACAAGATTGGGGCTGGAAGCTTTGGAGTTGTGTACAGGGGAAAGCTTGTGGACGGCCGTGAGGTGGCGATCAAGAGGGGCGAGATTGGCTCTAAATTGAAGAAGTTTCAAGAGAAAGAAAGCGCGTTTCAGTCCGAATTGTCCTTTTTGTCGCGGCTACACCACAAGCACTTGGTTAGGCTAGTTGGTTTCTGTGAGGAGAAAGAGGAGAGGCTCTTGGTTTATGATTACATGAAGAATGGTGCATTGTATGATCATTTGCACGCCAAGAACAATGTGGAGAAGAGTAGCAGTGTCTTGAATTCGTGGAAAATGAGGATCAAAATTGCCTTGGACGCCTCCCGGGGGATAGAATATCTCCACAATTATGCGGTTCCATCCATAATCCATAGAGATATCAAGTCTTCCAACATCCTCCTCGATGCGAATTGGACTGCTAGGGTATCTGATTTTGGATTGTCTTTGATGAGTCCAGAGCCAGACCGTGATCATCGGCCGATGAAGGCAGCCGGAACGGTTGGATATATTGATCCTGAGTACTATGGCCTAAATGTGATAACAGCAAAGAGTGATGTCTACGGCTTTGGAGTAGTTCTTTTAGAACTATTAACCGGAAAGCGAGCGATATTCAAGAATGGTGAAGATGGCGACACACCAATGAGTGTGGTGGACTTCGCGGTGCCTGCAATTTTGAGTGAGGAATTGGCGAAGATTTTGGACCCTAGGGTTGGACCACCAGATGCAAATGAAGCTGAGGCAGTGGAATTGATGGCAAAGATTGCAATGCTTTGTGTGAATTTGGAAGGAAAAGATAGACCAACCATTTCTGATATTGTTACCAATTTAGAGCGTGCATTGCTTCTTTGTGAAGGTTCTCATCATCATGATAGCAATTCCAGTGGTATAATCTCCATTGTCTCAGATTGA 2439 0.4785 MTPLSSSEILRLSAAVIFTLSLLIPTSHALGSGATLAVTDASDTVCGVVAGESTQRIECSRLGSQLVPAVPPNISFSTVSGGATFFCGLRSGNRTLLCWNTITTTNGTFTPKRLYNNDTVLLENLAVGETHVCATVVGAGTVTCWRTSKTFKSPSRSLQFSSISSGSGFSCGILKNSSQVRCWGETVISRVIENGFKNMSMWSIVAGGSHVCGLNSTGFLVCIGNNDNFGQLDVPKNEAWEFGELALGASHGCALRKLNGTGSVVCWGGDGNFTSEVTKGVSFEVIVSGSNFTCGLVTRNLSVLCWGPGWPNNNGSRFELPLPSVLPGPCVQSSCDSCGPYPDSQSLCSDSDSNICKPCWPPIQAPAAAMVPSSLPPGPAPRQRSRSRTLTRGLLAFAIVGSVGAVAGICTIVYCLWNGVCFGKKKVHNSVQPTITRGSSTSSGVSNNSRNNSRPLSRTSTIMRQGSRIMRRQRSGTSSTKHPDRAEEFALAELIAATDNFSPENKIGAGSFGVVYRGKLVDGREVAIKRGEIGSKLKKFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKEERLLVYDYMKNGALYDHLHAKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVITAKSDVYGFGVVLLELLTGKRAIFKNGEDGDTPMSVVDFAVPAILSEELAKILDPRVGPPDANEAEAVELMAKIAMLCVNLEGKDRPTISDIVTNLERALLLCEGSHHHDSNSSGIISIVSD 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01585 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Aip10g01585 812 Gene3D Phosphorylase Kinase; domain 1 462 581 - -
Aip10g01585 812 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Aip10g01585 812 MobiDBLite consensus disorder prediction 433 483 - -
Aip10g01585 812 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 803 - -
Aip10g01585 812 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 803 IPR044815 GO:0004674
Aip10g01585 812 SUPERFAMILY RCC1/BLIP-II 27 270 IPR009091 -
Aip10g01585 812 Gene3D Transferase(Phosphotransferase) domain 1 582 803 - -
Aip10g01585 812 CDD STKc_IRAK 507 788 - -
Aip10g01585 812 SUPERFAMILY Protein kinase-like (PK-like) 479 786 IPR011009 -
Aip10g01585 812 ProSiteProfiles Protein kinase domain profile. 501 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01585 812 Pfam Protein kinase domain 503 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01585 812 MobiDBLite consensus disorder prediction 433 476 - -
Aip10g01585 812 Gene3D - 199 353 IPR009091 -
Aip10g01585 812 Gene3D - 25 198 IPR009091 -
Aip10g01585 812 SMART serkin_6 501 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01585 Aip-Chr10 31607755 31610255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01585 4 812 Receptor kinase-like Gene Family AT3G55950 59.113 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip10g01585 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01585 - - gmx:100786639 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00849 07 9716277 9718481 Aip10g01585 10 31607755 31610255 ECH
Aip10g01585 10 31607755 31610255 Aip10g01585 10 31607755 31610255 ECH
Aip10g01585 10 31607755 31610255 Aip07g00849 07 9716277 9718481 PCT