Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01566 ATGGGTGTTAATGGAAAAGGAAAATTATCGTTTAGGGTGAGGGTGACCAATGAAGAGGTTGTAGCGGCGGTTTTGCCAATTCAAGACCATTGGCTACCACTCTCAAACCTTGATCTCATTCTTCCACCCATTGACGTTGGTGTCTTCTTTTGCTACAACAACAAAAACACACCAATGAGCTTTGGATCAATGGTGGTGTCCCTTAAGAATGCATTGGCTCAGGCTTTGGTTTCATATTATCCATTTGCTGGCGAGGTGCTGCAAAACTCCATGGGTGAACCGGAGCTTCTTTGTAATAACCGTGGGGTTGATTTTGTTGAGGCGGAGGCTGATATTGACCTTCAGAATCTTAACTTGTACAATCCTGATGAATCCATTGAAGGCAAGCTTGTTCCAAAGAAGCAGCATGGCGTCCTTACTGTTCAGGCAACACGTTTGAAATGTGGTGGAATAATAGTGGCATGCGCTTTTGATCATCGCATAGCAGATGCATACTCAGCAAACATGTTCCTAGTATCATGGGCCAAGATAGCCCGGCCCATGAAGCCCACTACCGTGGCCACCACCTCGGCACAACCGTGTTTTCGGCGCTCCCTCCTCATCCCTCGACGTCCTCTCTGCATCCAGCCTTCCCTTGACGACATGTATGTCCCCATGAATTCCCTTCCACCACCATCTGAACTCGAACCCAAACCCGAACCCGATAATTTTGACTCACTCATAAGCCGGATATATTACATCACTGCTGATCAACTCTGCCGCATTCAATCACTTGCAAGCTCATCATTAGATCATATCAAGAATCGTACAAAGCTTGAATCTTTCTCCGCGTTCTTGTGGAAGATGGTTGCCATGGCTACATCCTCCACCACCACCACCACCGGTGGCGGAAAAAGGCTTGTTGCCAAGATAGGTGTGGTGGTTGACGGAAGGAAGAGGCTGAGCAACGGTGACAAAAGCAAAGAAGCTACGATGGATAGTTATTTTGGCAATGTTGTTTCCATCCCTTTCGGTGGGAAACCGGTAGAGGAGTTGGTGGAGAAGCCGTTGAGTTGGGTGGCAGAAGAGGTTCACAAGTTTCTGGAAACGGCAGTGACGGAAGAACACTTCCTAGGGCTCATTGATTGGGTGGAAAAGCACCGTCCCTCACCAGTGTTGGCCAGAATTTATTGCGGCAACACAACTGATGTGGGACCCGCTCTTGTGGTGTCTTCTGGTCAAAGATTTCCCGAGTCAGAATTTGACTTTGGTTGGGGAAAACCTGTGTTTGGATCATACCATTTTCCTTGGGGTGGTGATGCTGGATATGTGATGCCAATGCCAAGTCCCAAGAGAAATGGTGATTGGGTGGTGTACATGCACCTTCTCAAACCCCACATACATTTCATTGAGTCTATTGCAAATGATGTCTTTAAGCCCTTCACTTGGGATTACCTCAACAATTAA 1446 0.473 MGVNGKGKLSFRVRVTNEEVVAAVLPIQDHWLPLSNLDLILPPIDVGVFFCYNNKNTPMSFGSMVVSLKNALAQALVSYYPFAGEVLQNSMGEPELLCNNRGVDFVEAEADIDLQNLNLYNPDESIEGKLVPKKQHGVLTVQATRLKCGGIIVACAFDHRIADAYSANMFLVSWAKIARPMKPTTVATTSAQPCFRRSLLIPRRPLCIQPSLDDMYVPMNSLPPPSELEPKPEPDNFDSLISRIYYITADQLCRIQSLASSSLDHIKNRTKLESFSAFLWKMVAMATSSTTTTTGGGKRLVAKIGVVVDGRKRLSNGDKSKEATMDSYFGNVVSIPFGGKPVEELVEKPLSWVAEEVHKFLETAVTEEHFLGLIDWVEKHRPSPVLARIYCGNTTDVGPALVVSSGQRFPESEFDFGWGKPVFGSYHFPWGGDAGYVMPMPSPKRNGDWVVYMHLLKPHIHFIESIANDVFKPFTWDYLNN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01566 481 Gene3D - 11 213 IPR023213 -
Aip10g01566 481 Gene3D - 224 467 IPR023213 -
Aip10g01566 481 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 10 475 - -
Aip10g01566 481 Pfam Transferase family 12 465 - -
Aip10g01566 481 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01566 Aip-Chr10 29938609 29940882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01566 22 464 Monolignol Biosynthesis Gene Families AT5G48930 28.070 2.15e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01566 - - cam:101501659 639.802