Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01545 ATGGCAACAACCTCAGTGCGCGTCAAAGAAGCTGTGCTCGTCACACCTTCTGACCCCACACCAACTGGGATTCTCCACCTCTCCGCTCTCGACTCCCAACTCTTTCTTCGCTTCACCGTTGAATATCTATTTGTTTACAGGCGATCCTCTGCCCTCGACCAGCCTGCCACCGTGTCACGTATGAAGTCGGCATTGGCAAGGGCGCTCGTTCCGTACTATCCCTTTGCCGGCCGAGTTCGCTCCAGGCCGGACGTCCCCAGCCTCGAGGTAGTCTGCCGGGCACAGGGCGCACTCTTCATCGACGCCTGCTCTGATGTCTACACTGCCAATGATTTTGAGAAGGCTCCCAAAACGGTTACACAATGGAGGAAGCTCTTGTCACTCTATGTTCCCGACGTTCTCAAAGGATCGCCGCCACTCGTCGTTCAGCTCACGTGGCTTGCCGATGGAGCCGCCGCAGTTGGCGTCGGAATCAACCACGCCCTCTGCGATGGCATAGGAAGCGCTGAGTTTCTCAACTACTTCGCTAATTTAGCTTCCCAAAGGTTTGGCCCTCGCGATTCTGATCTGAAGCCCAAGCCCGTCTGGGATCGCCACATCATGAACCCGCCGTCAAAGAAGAACGAGCGGGCTAACACGTATAACCACCCTGAGTTTGCACGGGTTCCCGATCTCTGCGGGTTTTTGAACAAGGTCACCACCGGGCTCAGGCCCACCTCCATTGTGTTCAACAAGAGGCGCATCAACGAGCTCAAGGGAGTAGCCCGTTACTCGAGCGAGTCGTCATCATCGTACACGTCTTTTGAGGTGCTAGCGGCCCATGTGTGGAGGAGCTGGGCCCGAGCATTGGGCTTTCCACCAAACCAGCAACTGAAGATTCTCTTTAGCATTAACGTGCGGAACCGGGTGAAACCGAACCTTCCAGAGGGTTACTACGGGAACGCGTTCGTTCTTGGGTGCGCACAGAGCAGTGCAAAGGAGCTTGTAGAAAAAGGAATCGGGTACTGTTCGGGCCTGGTGAAACGGGCCAAGGAGAGGGTGGATGGAGAGTACGTTAGGAGGGTGAGTGAGTTGGTGTCCGAGTGGAGGGTGAGTCCTGACCCTGTTGGTGTGCTCATAGTTTCTCAGTGGTCTCGTTTGGGCCTTGAGAGGGTTGAGTTTATGGGCCGGCCCATTCATGTTGGGCCCATATGCTGGGATAGATACTGCTTGTTTCTTCCGGTGAGGGATGAGACGGAGAGTGTCAGGGTTGCCGTGGCTGTCCCTGCCGCCGCCTTTGACAGCTACCATCGCTTTATTGCAGAATCCACTTCATGA 1317 0.5566 MATTSVRVKEAVLVTPSDPTPTGILHLSALDSQLFLRFTVEYLFVYRRSSALDQPATVSRMKSALARALVPYYPFAGRVRSRPDVPSLEVVCRAQGALFIDACSDVYTANDFEKAPKTVTQWRKLLSLYVPDVLKGSPPLVVQLTWLADGAAAVGVGINHALCDGIGSAEFLNYFANLASQRFGPRDSDLKPKPVWDRHIMNPPSKKNERANTYNHPEFARVPDLCGFLNKVTTGLRPTSIVFNKRRINELKGVARYSSESSSSYTSFEVLAAHVWRSWARALGFPPNQQLKILFSINVRNRVKPNLPEGYYGNAFVLGCAQSSAKELVEKGIGYCSGLVKRAKERVDGEYVRRVSELVSEWRVSPDPVGVLIVSQWSRLGLERVEFMGRPIHVGPICWDRYCLFLPVRDETESVRVAVAVPAAAFDSYHRFIAESTS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01545 438 Pfam Transferase family 5 426 - -
Aip10g01545 438 Gene3D - 1 221 IPR023213 -
Aip10g01545 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 432 - -
Aip10g01545 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 432 - -
Aip10g01545 438 Gene3D - 231 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01545 Aip-Chr10 29063404 29065156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01545 6 435 Monolignol Biosynthesis Gene Families AT5G48930 29.039 5.08e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01545 - - gmx:100803812 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01545 10 29063404 29065156 Aip10g01545 10 29063404 29065156 ECH
Aip10g01545 10 29063404 29065156 Aip07g00826 07 9099408 9104269 PCT