LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip10g01536	ATGAAGGGATATGAGCCTCGTTCAAGTTCTTCTTGTGCAGCCTGCAAATTACTCAAGAGAAGATGCATCCCCAACTGCATCTTCGCGCCGTATTTTCGCTCCGATGAGTGCAAGAAATTCGCAAAAGTTCACAAGGTGTTCGGGGCAAGCAATGTGAGCAAGATCCTCATTGAGGTCCCTGAAGAGCAAAGAGAGGACACGGTGAATTCTCTCGCATATGAGGCCGAAGCCAGGCTCCGCGACCCGGTTTATGGATGCATTGGCGCCATAGCGCTCCTTCAGAGGAAGATGGTAGAGCTACAACATGATCTGGCGATTGCTAAGGATCGTCTGGCTCGTGTTGTAGCTTCTACTACATCTGCCTCTGATTCTGCTTTGGTCGCTACTACTAGTAGCGACCAAATCATGCATGGTTCTTCTTCTTATTCCCATGTTAGCTTGCCCCCTTTTCCTTGCAGTGATTTCAGTGATAGCTTCTGCCATAGCTCTTCTTCTTCATCTCAATTCTTGAGCCGACATGATCAAGCGGTTGATGATTTCACTCAAATTCCATACATATTTTAA	564	0.4699	MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARVVASTTSASDSALVATTSSDQIMHGSSSYSHVSLPPFPCSDFSDSFCHSSSSSSQFLSRHDQAVDDFTQIPYIF	187

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip10g01536	187	Coils	Coil	90	110	-	-
	Aip10g01536	187	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 21	1	165	-	-
	Aip10g01536	187	Pfam	Lateral organ boundaries (LOB) domain	11	108	IPR004883	-
	Aip10g01536	187	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	1	165	-	-
	Aip10g01536	187	ProSiteProfiles	LOB domain profile.	10	111	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip10g01536	Aip-Chr10	28687077	28688042	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip10g01536	1	111	AS2 family	AT3G11090	81.081	1.31e-64	194

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Aip10g01536		LOB	1.6e-37	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip10g01536	-		-	gmx:100305534	253.447

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip10g01536	10	28687077	28688042	Aip10g01536	10	28687077	28688042	ECH