Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01517 ATGCTGCATCGATCTTTTGATTCTTCTATTCAAGAAGGTGGAAATGAAGCTATCATGCTGCCTGCACTCGGCACCACCACCACCACTTCTACTGCCGCCACACCACATTTTTCGGTCCCTCTGTATTATTGTGCTTCGTCTCTACCCCTGCGAACTACTCAGTGGCACTCTATATATCTTGATATGGAAGATGGAAGTGAAAATGTGCTTGAGTCGTCTAAGAGGGTTTCCATCAGCAAGGACAATGCAAAAGACGACATTGTTTACTTGGCACTGAAAGTTGGTGCTGCCATGGGATACCTAGCTCCTGAATACATTACCGCTGGATGCATCACCGAGAAGAGTGATGTTTTTGCATTTGGTGTCATTGTTCTTCAAGTCCTGTCTGGGAAGACAACAGTAGGGGATTCAATCAGAATGACAGTTGAGTTTTTCAGATTTGATGATTTCGTGGACACAAATCTAAAGTGA 471 0.4416 MLHRSFDSSIQEGGNEAIMLPALGTTTTTSTAATPHFSVPLYYCASSLPLRTTQWHSIYLDMEDGSENVLESSKRVSISKDNAKDDIVYLALKVGAAMGYLAPEYITAGCITEKSDVFAFGVIVLQVLSGKTTVGDSIRMTVEFFRFDDFVDTNLK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01517 156 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 85 156 - -
Aip10g01517 156 Pfam Protein tyrosine and serine/threonine kinase 79 135 IPR001245 GO:0004672|GO:0006468
Aip10g01517 156 SUPERFAMILY Protein kinase-like (PK-like) 85 136 IPR011009 -
Aip10g01517 156 Gene3D Transferase(Phosphotransferase) domain 1 62 156 - -
Aip10g01517 156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 85 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01517 Aip-Chr10 27935674 27938621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01517 98 136 Receptor kinase-like Gene Family AT5G42120 58.974 1.49e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aip10g01517 PK_Tyr_Ser-Thr 6.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01517 - - gmx:100797612 124.405