Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01509 ATGTGTAAAATAGTTGAATTAAGAGAACATGTAGAGTTGTTTGTTGTGCACAAGGTTGAGGAGGAAGATGTGTTCCCAGATGCTGGCTACATTGATGTTGGGAGGGATCAAGGGATTGGTGATAAAGGGCAAAACCAACCTGAACCAGGTGTTGATGTTACTAGGACAGAGTCTAGTGACAATGATAAGGACGAGCATCACGAAGCTAAGTTTGCTAATATTGGTGGATGTGATAGTGATAGTCTCGATTCTGAATATAAACCATCTGAAGAGAAAGATAACAGTACAGATGATTTATACTTCACCAACAGTGAAGATGAGCTTGATCTTGATATTAGTGGGTTCGAGGATGTGGATGTCATGATTGATAAATGTAAGGTAGCAAAGAAGAAAGGTGTGGAAACTGAGGATTTTGAAGATGATAAAGGAGCTGACAGTGATGAATTAGAATTGGACTACGAGGTTGGAGTTGGGGTTGATAAGGATGGTGGAAATGAGGGGTCAAACTCAGACCACGAGGGAGTGAGACACCTTAGGATTAGACTAAAATTAGACAGAAGGTCTAGGTCATCTGGGGAGTGGCGGCCATATTGGTCTGCAACTAAAAAATATGAGGAGCTTCCGATTCATCAAAGAGCAGATGCAGTGAGTAGCTTGGTATACGAAGCGAACGCAAGGGTTCGTGACCCGGTGTATGGATGCGTGGGAGCCATATCATACCTTCAGAACCAAGTCTCAGAGCTTCAAATGCAGCTTGCTGTTGCGCAAGCAGAGATACTCTGCATCCAGATGCAGCATGAACCCTCTGTAGCCGCAGCAATACCCAATCCACAACAAATAATGGAGTTTCAAGAACAGAACAATAATAATAATGAACTCACTCACCATCACCATCACCACCATCAGTACCTTAACTTTGCAGCTTCTTCTAGCAATGTAATCCATGATTCTCTCTCTAGAGAGACTTTGTTTGGACATGACATGGTTTCTTAA 993 0.425 MCKIVELREHVELFVVHKVEEEDVFPDAGYIDVGRDQGIGDKGQNQPEPGVDVTRTESSDNDKDEHHEAKFANIGGCDSDSLDSEYKPSEEKDNSTDDLYFTNSEDELDLDISGFEDVDVMIDKCKVAKKKGVETEDFEDDKGADSDELELDYEVGVGVDKDGGNEGSNSDHEGVRHLRIRLKLDRRSRSSGEWRPYWSATKKYEELPIHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPSVAAAIPNPQQIMEFQEQNNNNNELTHHHHHHHQYLNFAASSSNVIHDSLSRETLFGHDMVS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01509 330 Coils Coil 238 258 - -
Aip10g01509 330 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 202 309 - -
Aip10g01509 330 MobiDBLite consensus disorder prediction 55 73 - -
Aip10g01509 330 Pfam Lateral organ boundaries (LOB) domain 202 256 IPR004883 -
Aip10g01509 330 MobiDBLite consensus disorder prediction 30 100 - -
Aip10g01509 330 MobiDBLite consensus disorder prediction 83 99 - -
Aip10g01509 330 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 202 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01509 Aip-Chr10 27684140 27688612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01509 201 270 AS2 family AT2G30130 84.286 1.05e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip10g01509 LOB 6.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01509 - - aip:110268396 223.402