Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01494 ATGGGGAAGGAGGATCTTTTGCACCATCTTAATGTGTCATTCATGATACATATGGTACGGACGTCAATATTGTTACCCGCCGCTGCCCAGCTTCTCCGTGAACGTCCGATCACATCACACCAGCCCCGGACAGCCTCTTTCGCACTGCCCACCCACCACCAGCCATGCAGCCTCCCCCGCAACCAGTTTAATCatgGGATTTATAGGCCTGCAGAGTTTTGGCAACTGGAAGATCAAGCGCCACAAGCTCTAAAAAAGAGGCATGGATCGTCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATCTTCTTGGAAAAGGTGGATTTGGAAAGGTATACAGAGGAACTCTGCAAGGACAGGTTGTAGCAATAAAAAAGATGGAGCTGCCAGCTATTAGAGAAGCTAAAGGAGAGCGCGAATTTCGGGTGGAAGTGGACATATTGAGCAGACTAGACCACCCAACTCTTGTTTCCTTGATTGGCTACTGTGCTGATGGAAAGCACGGATTCTTAACCGGAAAACTCACTCTACAAAGTGATGTTTATTCTTTTGGCGTTGTTCTTCTGGAGATTTTGATTGGACGTAGAGTCGTAGATCTAAACCAAGGTCCAAATGATCAAAACCTTTTGCTCCAGGTGAGACACCTACTAAATGACCAGAAAAAGCTTCGAAAGGTGATAGATGCAGAGATGGCATTAAATTAG 726 0.4559 MGKEDLLHHLNVSFMIHMVRTSILLPAAAQLLRERPITSHQPRTASFALPTHHQPCSLPRNQFNHGIYRPAEFWQLEDQAPQALKKRHGSSVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGTLQGQVVAIKKMELPAIREAKGEREFRVEVDILSRLDHPTLVSLIGYCADGKHGFLTGKLTLQSDVYSFGVVLLEILIGRRVVDLNQGPNDQNLLLQVRHLLNDQKKLRKVIDAEMALN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01494 241 Gene3D Phosphorylase Kinase; domain 1 83 178 - -
Aip10g01494 241 Pfam Protein kinase domain 106 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01494 241 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 178 239 - -
Aip10g01494 241 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 62 178 - -
Aip10g01494 241 PANTHER OS01G0750732 PROTEIN 62 178 - -
Aip10g01494 241 SMART serkin_6 105 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01494 241 ProSiteProfiles Protein kinase domain profile. 105 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01494 241 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Aip10g01494 241 SUPERFAMILY Protein kinase-like (PK-like) 94 222 IPR011009 -
Aip10g01494 241 Gene3D Transferase(Phosphotransferase) domain 1 179 238 - -
Aip10g01494 241 PANTHER OS01G0750732 PROTEIN 178 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01494 Aip-Chr10 26891753 26895408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01494 179 225 Trihelix Transcription Factor Family AT1G68690 51.064 8.10e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Aip10g01494 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01494 - - ahf:112785688 267.314