Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01453 ATGTCATCAACAACCGAGTCCGTCGGTGAACATGTCTTCATCCAAGAACAAGGGCAAGCGACCTGCAACAAATGTTCAACAAAACTAGCAACACCGGCCACTACATTTTCTGAAGCCAATAATAAGGCATGCATGCTTCAAATTGGCCCTCCCGATCGGTCCAAACAAACTCTCGAGCCAGACCCCTACATAACTCTGGTTGTCCCTGACGGCAGGGGTATCAGCCGTCGGTGCTTCTGGAAACAACAGCAAAATGGCAGCATAGCATTGACCCGTGGTTGGCCAGAGTTCTACCAGATGCACCAAATTAATCTAAACTCCATGCTTCTTTTCAAGCACAAGGGCAACTCTGAATTCCAAGTACGTATCTTTGACTTCGGTGGCCGCGAATACACATACCATCCCCGACCGTCCAAGGAATTGCCGTACGAAGTGAAAGGTACTTACCGGCATGCCCGCTGTATCAACAATCCTTCCTCACACAAGGCAAAAGCGATAGCCGAAACACACAAGACCAAATGGCCATTCTTTGTCATGGACCTCACTAGCCACGTCTTGTCCTCCCACCTTGACACACCCTCATCCTATCACACGAACACATTGAGGTCGAGGCCACATAAACCAGATTTAGTGGCAAGCGAGATGGTAGCTTCGTGGTCATCTCCGGATAATGGGCACACTTTGCTAGCCTATGCAAATTCGAGCCCGAAGGTGTGGGGATATTCGAGGTCATGTCAACTGAGCCAGTCACAGTACTACAGGTCCGATGGAGCAACGACGCTGCAAGCTCCTGAATCTTGTTATCCTTATATTGTTAACCAGACTTCGGCTGTGTCCTGTCTCCCAAGATCTGTAATGCTCACTAGGTGTCGTCGTTGCTCTGTATTAGACCGTCAGACACCTCCGTCATTCAATCTCCCATCCTTGAACCCTCTTAGTGGAATCGAGTTTCGTCGCTGGGCTTACGGAGCTCTCCGTAAGTGGCCGGCATCGCGCCGATGCCTCACCTCACCAAATCTCCTCTCCATTTCATCACCACCATGCGAATGA 1050 0.5 MSSTTESVGEHVFIQEQGQATCNKCSTKLATPATTFSEANNKACMLQIGPPDRSKQTLEPDPYITLVVPDGRGISRRCFWKQQQNGSIALTRGWPEFYQMHQINLNSMLLFKHKGNSEFQVRIFDFGGREYTYHPRPSKELPYEVKGTYRHARCINNPSSHKAKAIAETHKTKWPFFVMDLTSHVLSSHLDTPSSYHTNTLRSRPHKPDLVASEMVASWSSPDNGHTLLAYANSSPKVWGYSRSCQLSQSQYYRSDGATTLQAPESCYPYIVNQTSAVSCLPRSVMLTRCRRCSVLDRQTPPSFNLPSLNPLSGIEFRRWAYGALRKWPASRRCLTSPNLLSISSPPCE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01453 349 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 64 164 - -
Aip10g01453 349 CDD B3_DNA 42 125 IPR003340 GO:0003677
Aip10g01453 349 PANTHER B3 DOMAIN-CONTAINING 64 164 - -
Aip10g01453 349 SUPERFAMILY DNA-binding pseudobarrel domain 45 126 IPR015300 -
Aip10g01453 349 Gene3D - 33 126 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01453 Aip-Chr10 25423160 25425724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01453 51 166 B3 DNA Binding Superfamily AT3G18990 28.926 1.14e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01453 - - aip:107615148 227.639