Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01447 ATGGCAAATGTGGTGGAGTTGAAAGTTGGTTTGCACTGTGACGAGTGCATCAAGAAGATCCTCAAGGCCATCAAGAAAATTGAAGATATTGAAACGTATAATGTGGACACGGAGATGAACAAGGTAACTGTTACGGGGAACGTTACAAGAGAAGAAGTGATCAGAGTTCTTCACAAGATTGGGAAGAATGCTGCTGTTTGGGAAGATGATACTAAAACCAACAATTACACGTCATTATGCATCAGTTTCGGCGTCAACACTAGTCAAGTGAATAGGACAATAATGGTGTGTCAAAATCCACACAGCTATGGTCACAAGGATGTTTGGCACTTAGGCAACCCTCTAGATTCTCCAACTTCTCTTCTATTTGTTCAGGTTTCTTTAATCACCATGCTATCACAAGTGATTGAGGTTTGTCTCAAGCCATTAGGACAATCATCCCTTGTTTCACAGATTCTTGGTGGAGTGATATTTGGGCCATCAGTATTGGGACAAAAGAAATCACTAGCAAATGCTTTGTTCCCAATGAAAGGTGCCATGGTGCTTGAAACACTTGCATCTTTTGGCCTAATGTTCTTCTTCTTCATAGTAACGGTGAAGATGGACATTGCAACAATGTTAAGGACAGAGAAACAAGCCATAGCGATTGGTCTCTCCACATTCTTCATCACATTGGTAATCCCAGGTGGATTATCATTTCTATTAAAGAACTATATTTCTATGGACAAAAGCCTCTCAGAAGCTCTACCAGTCATAGCCATGTCACAAGCCATGACCGTCTTCATAGTGGTCTCCGTCCTCTTGACAGAGCTCAAGATCCTTAACACGGACATAGGCCGGCTAGCTATGTCCTCGGCTATGTCGGCCGACATTGTTGGCTTCTCATTGACAGTTCTAATGTTTGCAATAATGCAGAACAAGGGTGGCACCATTGTGTCCTTTCTTTGGATAATTCTGTCCATAGCTGCATTGGTAGTCCTCATCATTTATGTCATGAGGCCGGCCGTCATCTGGATGCTGAGGCGATCAGAAGGGAAGCCGGTCGACGAATTGTACATTGTTTGTATCTTTATCTTTGTTCTGATCGCCGGATTCCTCAGCGAACTTATCGGCCAGCATTTCATCATGGGGCCTATACTCTTCGGCTTGGCAATCCCCGAAGGGCCGCCCATGGGAACCACTTTGATAACTAAAATGGAGACTATATGTCTTGGATTCTTTTATCCAATCTACCTTGCTGTTAGTGGATTGAAAACTAATGTGTTCAAGATAAGCTTCCAGTCCTTTTGGATTGTTGGTGTTGTAGTTTTTGTGGCTTCCATTGCAAAGATTGTTGCTGTTATGTTGCCAGGAGGCATAGCAGAACTTACCCTTTACAATATGTGGAAGGGTAGCAAGTTATTAACGGAGCAAGAGTTCTCTTTGATGGTGGTATTCATTTTGATTGTAAATGCTATCATATCACCGCTTCTAAAGATGTTATATAATCCTTCAGAACAATACCATGCCTTAGGAAGATGCACAATTCAGCACACAAGGCGAGATTCGGAGCTTCGAGTCATGATCTGCATTCACAACAACGAAAACATCCCTACACTGATGAACATTCTAGAAGCTTCCTATGCAAGCGGAGAGAGCATGGTTGGAGTCATAGCATTAATCCTAATAGAACTTCTTGGAAGATCAAGGCCTCTTCTTGTTGCTCACCAAGAACATGAAACATTGAGGTCAGAACCATGCAGCTCAACTCAAATAGACAATGCATTGAAGCAATATGCACAACAGAACGAAGGTTATGCAACAGTTGAGTCCTTCTCATCGATCTCAAACTTGGACACAATGCACGATGATGTCTGCAGAATAGCACTTGACAAAAGAGCCCACATTCTAATCGTGCCATTTCACAAGCGTTATGAGATAGATGGAACAGTTGAAGTGATTAACAGAGCAATGCAGATTATGAACAACCGAGTCCTCGAAAAAGCGCCATGCTCAGTTGGAATCCTCATTGACAGGGGAATCTTGTGCGGATCCTCATCACTCTTAGTCTCTAGGACAACATACCACGTCGCCGTGTTCTTCATCGGCGGCGCGGACGACGCGGAGGCGCTTGCTTACAGCTCAAGAATGGCCCGGCACGAGATAGTCCACGTGACGTTAGTCCGATTCCTGCTCTTCGGAGAGGAGAATTCGAAGGAGAGGAAGCGTGACAGCGACCTTGTGGATGAGTACAGATACTATAATGCAGGGAACCGCCACTTTGAAGTGATGGATGAAGTGGTTAAAGATGGGATAGAGATGAGTTCTTGTATAAGAAGGATAATTGACTATTTTGACCTTGTGATGGTTGGAAGAGAACACCCTGAATCTGTTCTGCTTCAAGGGCATGATCAATGGAGCGAGTGTCCCGAGTTAGGGACAATTGGGGACATGTTAGCTTCACAGGATTTTGTGACAAAGGCTTCGTTGCTTGTGGTGCAACAACAGAGGGTAAGAGGAAGGGTTATTAAGAACACTAATGTGAATCCTATGCCACCTCAAAAGGATCAAATGATGATGGTACCTGATGTTGTTCTTCCTCATGATGAGGTCAATAGAGCTTCTTGTTCTATTTCAGTAGTGGACAGATGA 2631 0.4356 MANVVELKVGLHCDECIKKILKAIKKIEDIETYNVDTEMNKVTVTGNVTREEVIRVLHKIGKNAAVWEDDTKTNNYTSLCISFGVNTSQVNRTIMVCQNPHSYGHKDVWHLGNPLDSPTSLLFVQVSLITMLSQVIEVCLKPLGQSSLVSQILGGVIFGPSVLGQKKSLANALFPMKGAMVLETLASFGLMFFFFIVTVKMDIATMLRTEKQAIAIGLSTFFITLVIPGGLSFLLKNYISMDKSLSEALPVIAMSQAMTVFIVVSVLLTELKILNTDIGRLAMSSAMSADIVGFSLTVLMFAIMQNKGGTIVSFLWIILSIAALVVLIIYVMRPAVIWMLRRSEGKPVDELYIVCIFIFVLIAGFLSELIGQHFIMGPILFGLAIPEGPPMGTTLITKMETICLGFFYPIYLAVSGLKTNVFKISFQSFWIVGVVVFVASIAKIVAVMLPGGIAELTLYNMWKGSKLLTEQEFSLMVVFILIVNAIISPLLKMLYNPSEQYHALGRCTIQHTRRDSELRVMICIHNNENIPTLMNILEASYASGESMVGVIALILIELLGRSRPLLVAHQEHETLRSEPCSSTQIDNALKQYAQQNEGYATVESFSSISNLDTMHDDVCRIALDKRAHILIVPFHKRYEIDGTVEVINRAMQIMNNRVLEKAPCSVGILIDRGILCGSSSLLVSRTTYHVAVFFIGGADDAEALAYSSRMARHEIVHVTLVRFLLFGEENSKERKRDSDLVDEYRYYNAGNRHFEVMDEVVKDGIEMSSCIRRIIDYFDLVMVGREHPESVLLQGHDQWSECPELGTIGDMLASQDFVTKASLLVVQQQRVRGRVIKNTNVNPMPPQKDQMMMVPDVVLPHDEVNRASCSISVVDR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01447 876 Gene3D - 2 66 - -
Aip10g01447 876 Gene3D - 120 503 IPR038770 -
Aip10g01447 876 PANTHER CATION/H + ANTIPORTER 93 451 - -
Aip10g01447 876 Pfam Heavy-metal-associated domain 8 62 IPR006121 GO:0046872
Aip10g01447 876 PANTHER CATION/H + ANTIPORTER 452 843 - -
Aip10g01447 876 Pfam Sodium/hydrogen exchanger family 128 449 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip10g01447 876 SUPERFAMILY HMA, heavy metal-associated domain 4 68 IPR036163 GO:0046872
Aip10g01447 876 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Aip10g01447 876 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 93 451 - -
Aip10g01447 876 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 452 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01447 Aip-Chr10 25232433 25240200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01447 95 828 Antiporter Super Family AT2G13620 35.623 2.54e-163 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01447 - - adu:107469318 1485.32