Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01442 ATGATAACACCAGGAAGGCGGGGTTTACTCACTAGTGCTCCCCCAGTCCCCAACCTTCGTTCTCACCGTCAAAGAAGCCGTACGCTCGCCGTCGTTCTCACCCTCAAGCAGCCGACTCTCTTTCGCCCTTCCCTCAACTCCCCTTTTCTAGCAAAACACTATGCTGAGTTAGAACTTGCCACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCATTCACAGAGGGGTTCTACCGGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCATCGAAATGTTGTTATGCTAATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTACGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAGACAGCAAAAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTCATGGGTTACGATATCTTCATGAAGAGTGTAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTGATGTTTATTCATTTGGGGTGGCACGACCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGAGAAACCGGAGTGGCCGACTCTGGTTGGAGCCGCTGCAGAGGCAGCACCATTACAAGGGTCCTCTGTTAGAGGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATAG 1095 0.4712 MITPGRRGLLTSAPPVPNLRSHRQRSRTLAVVLTLKQPTLFRPSLNSPFLAKHYAELELATGGFSEANFLAEGGFGSIHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQKPLEWAARQKIAIGAAHGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDVRNRSGRLWLEPLQRQHHYKGPLLEESLESFSGKLSLDK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01442 364 Gene3D Phosphorylase Kinase; domain 1 30 139 - -
Aip10g01442 364 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 53 253 - -
Aip10g01442 364 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 254 362 - -
Aip10g01442 364 ProSiteProfiles Protein kinase domain profile. 64 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01442 364 Pfam Protein tyrosine and serine/threonine kinase 69 254 IPR001245 GO:0004672|GO:0006468
Aip10g01442 364 SUPERFAMILY Protein kinase-like (PK-like) 47 324 IPR011009 -
Aip10g01442 364 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 254 362 - -
Aip10g01442 364 MobiDBLite consensus disorder prediction 1 23 - -
Aip10g01442 364 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 53 253 - -
Aip10g01442 364 ProSitePatterns Tyrosine protein kinases specific active-site signature. 185 197 IPR008266 GO:0004672|GO:0006468
Aip10g01442 364 Gene3D Transferase(Phosphotransferase) domain 1 140 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01442 Aip-Chr10 25043101 25045692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01442 54 312 Trihelix Transcription Factor Family AT1G70460 50.000 2.05e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip10g01442 PK_Tyr_Ser-Thr 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01442 - - ahf:112783851 649.818