Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01436 ATGATAACACCAGGAAGGCGGGCTTTACTCACTAATGCCCCCCAGTCCCCAACCTTCGTTCTCACCGTCGAAGAAGCCGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAATCCGAGTAATTGGAACATTCCGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTGATGTTTATTCATTTGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAAGGGTCCTCTGTTAGAGGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATAG 639 0.4883 MITPGRRALLTNAPQSPTFVLTVEEAVGDFGLARWQPDGDTGVEIRVIGTFRYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYKGPLLEESLESFSGKLSLDK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01436 212 PANTHER OS01G0750732 PROTEIN 24 212 - -
Aip10g01436 212 Gene3D Transferase(Phosphotransferase) domain 1 17 168 - -
Aip10g01436 212 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 24 212 - -
Aip10g01436 212 SUPERFAMILY Protein kinase-like (PK-like) 27 169 IPR011009 -
Aip10g01436 212 Pfam Protein tyrosine and serine/threonine kinase 27 155 IPR001245 GO:0004672|GO:0006468
Aip10g01436 212 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01436 Aip-Chr10 24966911 24968517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01436 24 175 Trihelix Transcription Factor Family AT1G70460 50.617 2.67e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip10g01436 PK_Tyr_Ser-Thr 4.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01436 - - ahf:112783851 373.244