Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01429 ATGGCAACGAAGAAGCAGAACGATGATAACACCAGGAAGGCGGGCTTTACTCACTGTCGAAGAAGCCGTACGCTCGCCGTCGTTCTCACCCTCAAGCAGCCAACTCGCTTTCGCCCTTCCCTCAACTCCCCTTTTCTAGCAAAACACTATGCCGAGTTAAAACTTGCCACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCGGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTTGTGGGTTACGATATCTTCATGAAGAGTGTAAAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTAATGTTTATTCATTTGGGGTGGTATTGGTGGAGATTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCTCTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATAATGGACGGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGGGGTCCTCTGTTAGAGGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATAG 1026 0.4844 MATKKQNDDNTRKAGFTHCRRSRTLAVVLTLKQPTRFRPSLNSPFLAKHYAELKLATGGFSEANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEREPLEWAARQKIAIGAACGLRYLHEECKVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKANVYSFGVVLVEIVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRIMDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYRGPLLEESLESFSGKLSLDK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01429 341 SUPERFAMILY Protein kinase-like (PK-like) 43 294 IPR011009 -
Aip10g01429 341 Gene3D Transferase(Phosphotransferase) domain 1 95 296 - -
Aip10g01429 341 Pfam Protein kinase domain 105 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01429 341 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 106 339 - -
Aip10g01429 341 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 49 106 - -
Aip10g01429 341 ProSiteProfiles Protein kinase domain profile. 1 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01429 341 ProSitePatterns Tyrosine protein kinases specific active-site signature. 136 148 IPR008266 GO:0004672|GO:0006468
Aip10g01429 341 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 106 339 - -
Aip10g01429 341 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 49 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01429 Aip-Chr10 24851439 24854017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01429 50 281 Trihelix Transcription Factor Family AT1G68690 47.143 6.93e-77 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip10g01429 Pkinase 4.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01429 - - ahf:112783851 667.922