Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01428 ATGGATCCGTCGGATAGCGATTTTTTCGGATCAGACTCCGATGTTGGGTTCCCTAGAGGAGACGATCTAGACTTTTTAGACGACGATTCAGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATATCAGAGCTGTCACAAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTCTATCGATTCTATAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGATGCGATAGCGATGGTTCCATAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCCGGCTAGAATTCGTGCAAGACTAGATACAAAAATTCAGCAATGGAAGGTTGTTTTGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACATTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGATCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGCCATTCAACCAAAAAGACATGTACAACCTCATTACTCAATATAGGAAGGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTATCTGAGAGGTAAAGTTGGGAACGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTCTGGGCTGATGGGACTAGCCGCATTGATTATGAGTGCTTTGGGGATGTATTGACATTTGATTTGACTTACAATAGGAATGTCTACAATAAACCACTTGTTATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCGTATTCGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAGTAAACACCCTACGGTAGTTGTCACTGACGGAGATCTTTCAATGAGAGAAGCAATTAAACAGGTCTTTCCTTCTGCAACACATCGACTATGTGCATGGCACTTACATAGGAATGCATGCGAGAAGGTTAAAAACAGTGGATTTCTAATGGACTTCAAGCAATTGATTTATGCCAATGTGAGTGTTGAAGAGTTTGAGGTCAGGTGGGAAGACATGGTGGCCAGGTATAACTTATCAAGCAACTCTTGGGTCATCCAAACCTATGAGATGAGGAATCTATGGGCTCTTGCATATTTAAGGGACCAATTTTTTGGGCGAATCAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTAATAAAAGCATATATGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTGGTTATCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGCTCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACATTTTTGGAGTGCCAGAGATTCATCATGTGGTTGAGTTTGACAGAATTCGGGAGATTCTTTGTTGCGAGTGTCTGTGGTTCGAAAATAGAGGAATTCCCTGCATGCATATATTCACCTGCCTAAAGCACCAACACGTTGAAGTCATTCCAGAAAGCTTAGTGTGCAAGCGTTGGACGAAGAATACCAAGAGTGACTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATTTGGCCTACGATGACTGCGTTGGTGACCCATTGGTGGTGAAGAGTAAGGGAGCTCCCAAGAAAAACTCAAAATTCAAGCAACAGAGAAAGTGTTCAAACTACAGTGTGACAGGGCACTACAACAAAAGTTGTCCTAATGCTCCTGGTAGAATCCCAAAGGAGCCAGTAGACGATGATACAGAAACGAATATCAGCAGCATCCTCCCTAAGCACAAAAGACATGACAGTATGAAAAATCAGCATAAGATGGAAAAAGATAGGAACATTAGTGGTGGAACAACACCAACCTCAGCAGCTAAGTCGGCTTTTATTGATCAAGTGAAAACATCAAGTCTTGGTCCCAATATCCTGGTTTGTGCGTCTACAAGTAACGAAGAGTCCGGGATGGGTTCCATACCAGCTGGGTCTTCTGTTGTGGCCCCTAAAACTGGAATGGCAGCTTGA 2361 0.4257 MDPSDSDFFGSDSDVGFPRGDDLDFLDDDSEADEDRPQDKRISELSQEDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRCDSDGSIIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCPARIRARLDTKIQQWKVVLFYEEHSHELVAPLDISMMPEYRTFSVSDKAQAKNLHDIGIRICHILGYLAAQKGGYANLPFNQKDMYNLITQYRKEKVKGGDANAAISYLRGKVGNDSYFFGKYTLSNENRLENLFWADGTSRIDYECFGDVLTFDLTYNRNVYNKPLVIFSGSNHHGQTVVFGCGLLVNEDIGSYKWLLETFLEAMGSKHPTVVVTDGDLSMREAIKQVFPSATHRLCAWHLHRNACEKVKNSGFLMDFKQLIYANVSVEEFEVRWEDMVARYNLSSNSWVIQTYEMRNLWALAYLRDQFFGRIRTTSQCEGINSLIKAYMRKKDTLLEFINNMETVVIHYRNNERVAEFNSKYTAPVLVTSLPTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIQDGGKLYFKCNIFGVPEIHHVVEFDRIREILCCECLWFENRGIPCMHIFTCLKHQHVEVIPESLVCKRWTKNTKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDLAYDDCVGDPLVVKSKGAPKKNSKFKQQRKCSNYSVTGHYNKSCPNAPGRIPKEPVDDDTETNISSILPKHKRHDSMKNQHKMEKDRNISGGTTPTSAAKSAFIDQVKTSSLGPNILVCASTSNEESGMGSIPAGSSVVAPKTGMAA 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01428 786 MobiDBLite consensus disorder prediction 763 786 - -
Aip10g01428 786 Pfam MULE transposase domain 274 368 IPR018289 -
Aip10g01428 786 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 624 IPR031052 GO:0006355
Aip10g01428 786 MobiDBLite consensus disorder prediction 691 727 - -
Aip10g01428 786 ProSiteProfiles Zinc finger SWIM-type profile. 549 587 IPR007527 GO:0008270
Aip10g01428 786 Pfam FAR1 DNA-binding domain 63 152 IPR004330 -
Aip10g01428 786 PANTHER OS02G0262500 PROTEIN 48 624 - -
Aip10g01428 786 MobiDBLite consensus disorder prediction 681 736 - -
Aip10g01428 786 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01428 Aip-Chr10 24839992 24842573 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01428 MULE 9.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01428 - - aip:107620373 1501.11