Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01417 ATGAATCCTACTTTTCCTCTTGATGCATTTGTGTTCAAGACTATACCGGAATCGCTCACGGCCAAGAAGATCGAAAACTCAGAGCTATTTGACATGATTGGTGAGGTAGTTGGAAAGCATGATCCCAGAGAGTTGGTCACCAACAAAGGGAAGGAGAGCAAACGGTTGGTTGTGGTGTTGCAAGATCTGGAAAAAAATATGATTAACTCCACTTTATTTGGTGAAATGGTCGATGAGATACTACCACATTTGGAAGATGGAAGGCTGGAGTCACTTATTGTAGTTATACAATACTTTAAGGCAATTAGGTGGAATGGAAAAACTTCGGTCCAGAGTCATTTTGAGATCTCCAAACTCCACATCAATGCAGAGTTGAAGGAGGTTGTTGGATTTAGAAACATATTGCTAAAGGAGGCACCATCCAATGCTTCAAGAATAAGTCAAATGTCATCCCAGAGTGGCTGGTCTGGTGTGGAAGAGATTACTAATGGGTCTGCATTAGTTAAAACCATTGAAGAGGCCCTGAGTTCCAAAGAGGAGGGTCCTATTTGGGTTGCTGGAACTATTGTGGCCATAAATTGCAGAAATAATGATTGGTATTACAAGGCCTGCAGAAGATGTCCTAAGAAAGTTGAAACACTAGTTGGTAATAGATACGAATGTGACAAATGCGGCCACACGCATGGAATTGCATCTATAAGTGGCTATGATCAAGTGTTCACTGTGATGAAGATATGTGACGATGAAGAAGTTGTTGACAAAAACCTACCCAAGAATTTCGATGGGAATTCATTAGTGAATGTGACGGAGAATGGGTGTAGTAACTCACTTGATATGTTTGGGAACATTACTAATCTTAATACTGACACTGACCCTGATGCTCAATATACTATGGATGCTAGAGAAGATTCCATAACCAGTCTTAAGTGTAAAACCCCTGCTAAAAAAGTTACAAATGGCTTCAGATCTGGCTGTAGTAGTGCAAACCAGAATAAAAACGAGGGACAACTCTCAACAAATAAGTTTAGCTGA 1032 0.4031 MNPTFPLDAFVFKTIPESLTAKKIENSELFDMIGEVVGKHDPRELVTNKGKESKRLVVVLQDLEKNMINSTLFGEMVDEILPHLEDGRLESLIVVIQYFKAIRWNGKTSVQSHFEISKLHINAELKEVVGFRNILLKEAPSNASRISQMSSQSGWSGVEEITNGSALVKTIEEALSSKEEGPIWVAGTIVAINCRNNDWYYKACRRCPKKVETLVGNRYECDKCGHTHGIASISGYDQVFTVMKICDDEEVVDKNLPKNFDGNSLVNVTENGCSNSLDMFGNITNLNTDTDPDAQYTMDAREDSITSLKCKTPAKKVTNGFRSGCSSANQNKNEGQLSTNKFS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01417 343 Gene3D - 5 143 IPR012340 -
Aip10g01417 343 MobiDBLite consensus disorder prediction 321 343 - -
Aip10g01417 343 SUPERFAMILY Nucleic acid-binding proteins 169 228 IPR012340 -
Aip10g01417 343 Gene3D - 150 249 IPR012340 -
Aip10g01417 343 SUPERFAMILY Nucleic acid-binding proteins 25 135 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01417 Aip-Chr10 24288419 24290726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01417 5 224 Core DNA Replication Machinery Family AT4G19130 23.504 9.56e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01417 - K15255 aip:107620385 469.929