Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01412 ATGTCGCCGGCGGCGGGTGTCAACGTCCCCCTCCTGCCGGAATCCACTGGATCCTCTACTCAACCGGCGTCAGTCTCTGGCGCCGTCTTCAACGTGGCGACGACCATCGTCGGAGCAGGAATCATGTCGATCCCGGCGATCCTAAAGGTCCTCGGCGTTATACCTGCGTTCGCCATGATTGCAGTGATCGCAGTTCTCGCTGAAGTGTCAGTTGAGTTTCTGTTGAGGTTCACGCACTCCGGCAAAACGACGACGTACGCCGGCGTCATGAGAGAAGCGTTCGGAACCTTCGGAGCACTTGCCGTACAAGTTTGTGTCATCGTCACAAACATTGGAGCCTTGATTCTATACCTAATTATTATTGGGGATGTGCTATCTGGAAAGGGAAATGAAGGTGGAGAAGTGCACTTGGGCCTTCTGCAGCAGTGGTTTGGGATTCATTGGTGGAATTCCAGGGAATTTGCTTTGTTCATAACCTTGGTCTTTGTTATGCTTCCATTGGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCAGCAGTGTCAACTTTTCTGGCAGTGGTGTTTGTTGCAATATGTTCTGGGATGGCAGTTGTTGCAGTCTTGCAAGGAAAAACACAAACCCCAAGATTGTTTCCTCGCTTAGATTACCAAACATCCTTCTTTGATCTCTTCACGGCAGTTCCAGTTGTAGTTACGGCCTTCACATTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGGCATCCCACATGACCAAAGCGGTTCGACTAGCCTTGATGCTCTGTGCTGTCATATACTTTGCAATCGGTCTATTCGGGTACCTCTTATTCGGAGACTCGACACAATCGGACATTCTGATCAATTTCGATCAGAATGCTGGTTCTGCAGTTGGTTCCTTGCTCAATGGTGTGGTCCGCATAAGCTATGCATTACACATCATGCTGGTGTTTCCTCTTTTGAACTTCTCCCTGAGAGCCAACATAGATGAACTCCTCTTCCCCAAGAAGCCTATGCTTGCCAATGACAACAAAAGATTTGTGATCCTTACTCTGGTGCTTCTAGTCGTCAGCTACCTTGCTGCCATAGCTATTCCGGATATTTGGTACTTCTTTCAGTTTCTGGGATCCACAACTGCGTTGTGCCTTGCCTTTGTTTTCCCAGGAGCTATTGTTTTAAGGGATGCTTATGAGGTATCAACGAGAAGGGACAAAATTATAGCACTAGTTATGATTATACTAGCTGTAGTAACAAGTGTGATGGCCATTTCCACCAATGTATATAATGCTTTGAGTAGCAAGTCATGA 1317 0.4692 MSPAAGVNVPLLPESTGSSTQPASVSGAVFNVATTIVGAGIMSIPAILKVLGVIPAFAMIAVIAVLAEVSVEFLLRFTHSGKTTTYAGVMREAFGTFGALAVQVCVIVTNIGALILYLIIIGDVLSGKGNEGGEVHLGLLQQWFGIHWWNSREFALFITLVFVMLPLVLYKRVESLKYSSAVSTFLAVVFVAICSGMAVVAVLQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASHMTKAVRLALMLCAVIYFAIGLFGYLLFGDSTQSDILINFDQNAGSAVGSLLNGVVRISYALHIMLVFPLLNFSLRANIDELLFPKKPMLANDNKRFVILTLVLLVVSYLAAIAIPDIWYFFQFLGSTTALCLAFVFPGAIVLRDAYEVSTRRDKIIALVMIILAVVTSVMAISTNVYNALSSKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01412 438 Pfam Transmembrane amino acid transporter protein 23 427 IPR013057 -
Aip10g01412 438 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 436 - -
Aip10g01412 438 MobiDBLite consensus disorder prediction 1 23 - -
Aip10g01412 438 PANTHER AMINO ACID TRANSPORTER 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01412 Aip-Chr10 24127149 24129911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01412 1 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.447 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01412 - - gmx:100815694 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01412 10 24127149 24129911 Aip10g01412 10 24127149 24129911 ECH
Aip10g01412 10 24127149 24129911 Aip07g00778 07 8483308 8486691 PCT
Aip07g00777 07 8477127 8480124 Aip10g01412 10 24127149 24129911 PCT