Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01406 ATGGAGGCGAAGAAAGCAATGCCTCCTGATAAGCTCGCTGAGCTATGGACCATTGATCCGAAACGCGCCAAGAGAATTGAAGTGAGGTTGAGAAATATTTTGAAGGGAGACAATGACATTAGAAGTGCCAAAACCACGGTTGCTCTGTCTGTCATGCACACGAAAAGAAGGCTACATCAAATGATGTTTGCCAACCGTGATTATGAGAGAACTCCCATTCTCAAGTTTACTTATGATTCTCCGTTAGTGACTGTTCAGAATTGGGCCGAAAGGGGTTATTCGGTTGTGAATATCCAGTGCAAGGATCGAATCAAGTTATTATTCGATCTTGTATGCAACTTGACAGACATGGAATATGTTGTGTTCCATGCAATTATTACCACTAATGGTGACCAAGCCTACCTGGAGTTTTACATAAGACATAAAGATGGCACTCCAATTAGTTCAGACCCTTCAGACCGAAGCTACAACTCTTTCTACCCAATTGATCCTATACCAGGTTCGTGCTGTCCATCTGAAACCACTTGCATGATTTTGCCATGA 543 0.4254 MEAKKAMPPDKLAELWTIDPKRAKRIEVRLRNILKGDNDIRSAKTTVALSVMHTKRRLHQMMFANRDYERTPILKFTYDSPLVTVQNWAERGYSVVNIQCKDRIKLLFDLVCNLTDMEYVVFHAIITTNGDQAYLEFYIRHKDGTPISSDPSDRSYNSFYPIDPIPGSCCPSETTCMILP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01406 180 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 18 152 IPR040217 -
Aip10g01406 180 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 18 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01406 Aip-Chr10 23948926 23950051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01406 1 76 bZIP Transcription Factor Family AT1G06850 37.500 1.09e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01406 - - aip:110267805 275.789