Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01402 ATGAAGGAGAAGAATGAAAGAATTCGTAGAATAGGAGAACTTTTGACATATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTGGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGTTCCCATGTAGCTGGCTTGGCAAGCTGTAGGAAAGCCAATGCAATGGGTCGGTGGCTGTTCTCTTACCGACTACATGACGGATTGAAACTTTCCTTCAAACTTGGACTCTGTCATGTTTCGACAAGTCTTGCAAGGGATAGACTCGTTGAAAAGAGATGCCTTGATCTTACTTTGCTTGATAAGAAGATTCATGACACAGGCATTGTTCACTGGGATATAAAGCCTGCCAACTTGGTGGTTACTAAACACGAACAAATCAAATTCATTGATTTTGGTTCAGCTACTGACCTGCAAATCGGAAAGAATTATGTTTCCAATTTTACCCCTTTGGATCCTGACTATTGTCCCCCAGAATTGTATGTGCTACCTGAAGAAACAACTAGTCTTCATCCAGAGCCAATTGCAGCTTTTCTTTCACCAATATTGTGGCAGATACACATGAAAGGTGCTAAGATGAACCTCTATGATTTTGGAATCCTCAATGGGACTCCGGTAGAGAAGAACCACACTCACCGTATAGGAACATCACACCAGCTAAAGAAATCATTCCCTGTTTACATAGCATTTGCCAACGTTCTTTCTGCTACATTGGCACTTATCTTTTTGAGTTTTCATCCTCCGCAGCTAGCATGGAAGTTCAGCACTAAGTTGGAATCTCCCGACCAACAGGCGAACAGATTGATCATGGGAAACGCGGCGGTCCTCCATTTGGACAACCCCCTGAAAGAGGCTGATTGTGGGTGGCTGTCTCTGTACATCTTCGAAACTCGTGTAGAGGTTCCGGTTGCTGCTCCTCTTGACTGGACGTGGTTTTTCTTGGTGGGGTCGGCCACCGGCAAGCTATGTGCTAGGTTTCCAACAAATGGTCGTTCCAGTTCCTTGATCACATGGGACCCGTTGGGTTCCTGGAGGTATGTTATTCCTGATCCAGGGTCTGACTGTTACCACTTCAACCACCGTGATGACTGGTCTGCTTATGCCTTTGTTGGCGTGGTTGGTGGTGATGATTATAAGATTCTCAGCCTCACAAAGCGTCACCTGGCAGCTGCTGGATACGACATGTAG 1227 0.4499 MKEKNERIRRIGELLTYIRTLKMYGWELIFSGWLMETRSLEVKHLATRKYLDACSHVAGLASCRKANAMGRWLFSYRLHDGLKLSFKLGLCHVSTSLARDRLVEKRCLDLTLLDKKIHDTGIVHWDIKPANLVVTKHEQIKFIDFGSATDLQIGKNYVSNFTPLDPDYCPPELYVLPEETTSLHPEPIAAFLSPILWQIHMKGAKMNLYDFGILNGTPVEKNHTHRIGTSHQLKKSFPVYIAFANVLSATLALIFLSFHPPQLAWKFSTKLESPDQQANRLIMGNAAVLHLDNPLKEADCGWLSLYIFETRVEVPVAAPLDWTWFFLVGSATGKLCARFPTNGRSSSLITWDPLGSWRYVIPDPGSDCYHFNHRDDWSAYAFVGVVGGDDYKILSLTKRHLAAAGYDM 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01402 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Aip10g01402 408 ProSiteProfiles Protein kinase domain profile. 1 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01402 408 Gene3D Transferase(Phosphotransferase) domain 1 105 217 - -
Aip10g01402 408 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 115 199 - -
Aip10g01402 408 Pfam Protein kinase domain 117 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01402 408 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 115 199 IPR044803 GO:0004674|GO:0009579
Aip10g01402 408 SUPERFAMILY Protein kinase-like (PK-like) 117 175 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01402 Aip-Chr10 23923727 23930626 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aip10g01402 Pkinase 3.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01402 - - ahf:112697591 188.348