Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01397 ATGGAGTCTGGTGAGAGTGGGGGTTCGTCGGTTCGAGAGGTGCGTGCAAATGGAAACAGCATTAAAACATCAGAAGTTGAGGCTAAGCTTGATGAAGGGAATATTCAAGAAGCAGAATCAGCATTGCGAGAAGGCTTGTCTCTCAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGCTAGAGTATCAACGAGGTAATGTCGAAGGGGCTCTTCGTGTGTTTGATGGGATAGATCTTCAAGCAGCCATACAGCGATTGCAATCTTCCCTTTCTGATAAACCAGCCAAGAAAGGAGGTGGCTCAACTTCCACGAGCTCTCAGCATGCTGCTAGTTTGGTGCTCGAAGCCATCTTCTTAAAATCCAAGTCTCTACAAAAGCTGGGAAAGTTCACTGATGCTGCTAGTGAGTGCAAGCGTGTACTTGATGCTGTTGAAAAGATATTTTCTCAAGGTATACCTGATGCTCAAGTGGACAATAAATTGCAAGAGATAGTTAGCCATGCCGTAGAGCTCCTTCCAGAGCTTTGGAAAGAGGCCGGTTGCTATCCCGAGGCAATATCTGCATATAGGAATTCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCAAGAATTCAGAAAGCATTTGCTATGTTTTTGCTGTACAGCGGGGTGGAGGCAAATCCACCCAGTTTGGCAGTTCAGACTGAAGGGTCATATGTACCTAAAAATAATCTGGAAGAGGCGATTCTGCTTCTAATGATTCTTGTGAGAAAGTTTTGTCTTGGAAAGACAAAATGGGACCCCTCGGTAATGGAACACCTGACATTTGCACTTTCAGCATGTGGCCAAACCTCTGTTTTAGCAAAACAACTTGAAGAGTTGATTCCTGGTGTATATCATCGTATTGACCGTTGGAATTCATTAGCACTGTCTCTCAGTGCAGCTGGACAAAGCAAAACTGCATTGGATCTGCTAAGAAAGTCTCTGCACCGACATGAACGACCGAATGACATGATAGCATTATTATTGGCTGCTAGAATTTGCAGTGAGGATCCTCATCTTGCTGCAGAGGGTGCAGGCTATGCCCAGAGGGCAGTCAATAATGCTCGGGGTCTAGACGAGCATTTAAGAGGTGTAAGCCTTCGGATGTTGGGACTTTGCCTGGGAAAGCAAGCTAAGGCTGCTTCCTCTGACTACGAGAGGTCTCATCTTCAGGCCAAAGCTCTCCAATCATTGGACGAGGCAGCTAGATTGGAGCAAAAGAATTCTGATCTAATTTTTGAGTTAGCTGTTCTATATGCAGAGCACCGAAATCTGCCTGCAGCTTTACGCTATGCGAAGCAGTTCTTTGATGAAACTGGTGGATCTGTATTGAAAGGATGGAGATTGCTGGCTCTAGTTTTGTCTGCACAGAAAAGATTTTCAGAGGCTGAAGTGGTGACAGATGCTGCTTTAGATGAGACTGCAAAATGGGAGCAAGGTCCACTTCTCAGGTTGAAAGCGAAGCTGAAGATTTCCCACTTAAAAATTTGA 1521 0.4484 MESGESGGSSVREVRANGNSIKTSEVEAKLDEGNIQEAESALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQSSLSDKPAKKGGGSTSTSSQHAASLVLEAIFLKSKSLQKLGKFTDAASECKRVLDAVEKIFSQGIPDAQVDNKLQEIVSHAVELLPELWKEAGCYPEAISAYRNSLLSQWNLDNDCCARIQKAFAMFLLYSGVEANPPSLAVQTEGSYVPKNNLEEAILLLMILVRKFCLGKTKWDPSVMEHLTFALSACGQTSVLAKQLEELIPGVYHRIDRWNSLALSLSAAGQSKTALDLLRKSLHRHERPNDMIALLLAARICSEDPHLAAEGAGYAQRAVNNARGLDEHLRGVSLRMLGLCLGKQAKAASSDYERSHLQAKALQSLDEAARLEQKNSDLIFELAVLYAEHRNLPAALRYAKQFFDETGGSVLKGWRLLALVLSAQKRFSEAEVVTDAALDETAKWEQGPLLRLKAKLKISHLKI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01397 506 MobiDBLite consensus disorder prediction 1 24 - -
Aip10g01397 506 Gene3D Tetratricopeptide repeat domain 233 503 IPR011990 GO:0005515
Aip10g01397 506 SUPERFAMILY TPR-like 114 440 IPR011990 GO:0005515
Aip10g01397 506 Coils Coil 397 417 - -
Aip10g01397 506 MobiDBLite consensus disorder prediction 1 25 - -
Aip10g01397 506 PANTHER PROTEIN NPG1 1 503 IPR043376 -
Aip10g01397 506 Gene3D Tetratricopeptide repeat domain 26 215 IPR011990 GO:0005515
Aip10g01397 506 PANTHER CALMODULIN-BINDING PROTEIN 1 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01397 Aip-Chr10 23759845 23761995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01397 11 503 Calmodulin-binding Proteins AT2G43040 76.056 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01397 K21843 - gmx:100811897 783.097