Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01385 ATGGAGAAAAGGGGGAATGTTTTGATGCAAAAGTATGAATTTGGCAGGCTATTAGGCCAAGGAAACTTTGCAAAGGTTTACCATGCAAGGGACCTCAAAACCGGTGACAGTGTCGCCATTAAGGTGATCGACAAGGAGAAAATTCTGAAAGTTGGGATGATGGATCAAACCAAGCGAGAGATATCTATTATGAGACTGGTTAAGCACCCCAATGTGTTGCGGCTTTATGAGGTCTTAGCCACCAAAACCAAGATTTACTTCATCATAGAATATGCAAAAGGGGGTGAACTATTCAACAAGGTAGCAAGAGGTAAACTACATGAGGACATGGCAAGGAGGTACTTTCAACAACTGATCAGTGCTGTCGATTTTTGCCACAGAAGGGGTGTTTATCATAGGGATTTGAAGCCGGAAAACTTGCTCTTGGATGATAATGGTGTTCTTAAGGTAGCAGATTTTGGACTGAGTGCACTAGTTGAGTCTCATAGCCAAGCCAACATGCTGCAAACCGTTTGTGGAACGCCTGCATACGTCGCTCCTGAGGTTATAAGTCGAAAGGGTTATGATGGAGCCAAAGCCGATGTATGGTCTTGTGGAGTGATCTTATATGTTCTCTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGGCACTGTACAGGAAAATTACCAAAGCAGAATACAAATCTCCCAACTGGTTTTCATTTGAAGCGCGCAGACTATTAGCAAGGATCCTTGATCCCAACCCAAAAACAAGGATATCCACTGCAAAAGTTATGGAAAGTTCTTGGTTCAGAAAGGGGCTCAATTTGAGATCAGATCAAAAGCGGAGAGAGGGTCCAGATTCAGCTTCAGCTGATTCAGATAAAGTTCTCGGCCTATGTGACAGTGGAAGTTCTTCTGCAGAGGCAAATCAAGCATTGGTTAACTATAACTTAAATGCTTTCGATATAATTTCTCTTTCTGCCGGGCTTGACTTGTCTGGCCTTTTTGCAAGCATTGATGAACAGGATGGTGTAATGAAATTTACATCCATGAACTCTGCTTCATCAATCATTTCCACGTTGGAGAATATCGCTCAAGTTCTGGGGTTGAAGATAGCTAAGAAGGATGGAGGCCTGTTTAGACTAGAGAGATCCAGGGAAGGTAGGAAAGGGCCACTTTCCATTGATGTCGAAATATTCGAGTTTGCCCCCTCTTTCCATTTGGTTGAAATCAAGAGATCATGTGGTGATACAATAGAATACCAGAAGATATTGAAGGAAGATATAAAACCAGCTTTGAAAGATATTGTCTCAGTTTGGCAAGGTGAGCAGCAACAGCAATAG 1332 0.4227 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLKTGDSVAIKVIDKEKILKVGMMDQTKREISIMRLVKHPNVLRLYEVLATKTKIYFIIEYAKGGELFNKVARGKLHEDMARRYFQQLISAVDFCHRRGVYHRDLKPENLLLDDNGVLKVADFGLSALVESHSQANMLQTVCGTPAYVAPEVISRKGYDGAKADVWSCGVILYVLLAGHLPFYDLNLMALYRKITKAEYKSPNWFSFEARRLLARILDPNPKTRISTAKVMESSWFRKGLNLRSDQKRREGPDSASADSDKVLGLCDSGSSSAEANQALVNYNLNAFDIISLSAGLDLSGLFASIDEQDGVMKFTSMNSASSIISTLENIAQVLGLKIAKKDGGLFRLERSREGRKGPLSIDVEIFEFAPSFHLVEIKRSCGDTIEYQKILKEDIKPALKDIVSVWQGEQQQQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01385 443 SUPERFAMILY Protein kinase-like (PK-like) 8 282 IPR011009 -
Aip10g01385 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aip10g01385 443 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01385 443 CDD CIPK_C 315 430 - -
Aip10g01385 443 Gene3D Transferase(Phosphotransferase) domain 1 3 315 - -
Aip10g01385 443 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01385 443 PANTHER - 2 441 - -
Aip10g01385 443 Gene3D Kinase associated domain 1, KA1 316 436 - -
Aip10g01385 443 Pfam NAF domain 313 370 IPR004041 GO:0007165
Aip10g01385 443 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 441 - -
Aip10g01385 443 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Aip10g01385 443 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Aip10g01385 443 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01385 Aip-Chr10 23450092 23451423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01385 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 59.560 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip10g01385 Pkinase 2.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01385 K07198 - gmx:100816254 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01272 07 20310105 20312676 Aip10g01385 10 23450092 23451423 ECH
Aip04g02406 04 109250925 109252516 Aip10g01385 10 23450092 23451423 ECH
Aip01g00280 01 2987464 2988849 Aip10g01385 10 23450092 23451423 ECH
Aip10g01385 10 23450092 23451423 Aip10g01385 10 23450092 23451423 ECH