Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01368 ATGGCCGCCGCTAGAGTTCATCTCCTTTCTGCTTCTGCCATAAAGCCATTGAGATCGAGTCAAGGCATCTCTTTCACCTACGCGTTTCCAAATCTAATCGCGACGCCCAAGCCTTTGAGATCGAGAGAAAGTACCTCTTCGGTCAACTCTCCTCCACCAATGACGCTTATGTTCTCCATCGGCATTCTATCCCTTGTGTACGCTCTTCTTTCCACTCGTTCTCAGTTTCTGGTTAAACTTAAAGAACTTGAAGCTGATCTGCTTGAGAATAAGGCAAATAATGAGAAGTTACAACACACCTACAACGAGCTGGTAGAATATAAGCTTGTTTTGGAGAAGGTTGGTGAATTTTTCTCTTCAGCTCAAAACAGTGCTGTAGCTCAGCAGAGGGAGCATGATGTCCAAACAACTGTTAAAGGGTCGATTGACAGCCCATTATTACTAGAACAAGAGACAACAGCGTTTTCGGCTAAGCAGGTTAAGCTGGGTTTTATCAGTGGTCTTGTTCCGAGAGAAAAATCAATTTCTTTTGAAAGAATCTTGTTTCGTGCTACAAGGGGGAATGTATTTATGAAGCAAGCCGTGATTGATAAACCTGTGCTCGATCCAATATCAGGAGAGAAGGTGTCAGGAAAACTTTCAGAGTTGAAGACTACCATCGATGTAGGATTGCTTCATTGGAACACCTTAGTCTATTGGACATCATTGCTAATACCTGACAGAGTTGCCAAGTGCCAGGAGGCAAATCCCGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTATCATGTTTGGTGATTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACCTCGTAATCAGAGAGAAAAAGTATTCGAGTCAGAAACTTGGAAACATCATGCAAATGGCATTTGGTGAACGCTATGTTATTGTGATGATGGAAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTACTTTTGAACAAGCACTTGTTGAGTTTCTGAAGTGTTTCAGGTTGTTTGTGCAGTTTGAAAACAACAGTTTCATTGTGATGATTGCGGAATCTGTAGGGTTGGTGGTCAAGAGAATTATTTCCACTGCGAGAAGTGTGGGTCATGCTATTCAGTTACACTGCGTGACAATCATGTGTGTGGAGAACTCCATGGACATGTGCATTACTGGTTCTGTTATTGCAAttatgtag 1212 0.4208 MAAARVHLLSASAIKPLRSSQGISFTYAFPNLIATPKPLRSRESTSSVNSPPPMTLMFSIGILSLVYALLSTRSQFLVKLKELEADLLENKANNEKLQHTYNELVEYKLVLEKVGEFFSSAQNSAVAQQREHDVQTTVKGSIDSPLLLEQETTAFSAKQVKLGFISGLVPREKSISFERILFRATRGNVFMKQAVIDKPVLDPISGEKVSGKLSELKTTIDVGLLHWNTLVYWTSLLIPDRVAKCQEANPGVYTIITFPFLFAIMFGDWGHGICILLASLYLVIREKKYSSQKLGNIMQMAFGERYVIVMMEIFSIYTGFIYNEFFSTFEQALVEFLKCFRLFVQFENNSFIVMIAESVGLVVKRIISTARSVGHAIQLHCVTIMCVENSMDMCITGSVIAIM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01368 403 Coils Coil 78 100 - -
Aip10g01368 403 Pfam V-type ATPase 116kDa subunit family 242 328 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip10g01368 403 Pfam V-type ATPase 116kDa subunit family 78 210 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip10g01368 403 PANTHER VACUOLAR PROTON ATPASES 242 328 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip10g01368 403 PANTHER VACUOLAR PROTON ATPASES 76 209 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip10g01368 403 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 242 328 - -
Aip10g01368 403 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 76 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01368 Aip-Chr10 22900630 22905324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01368 242 327 Primary Pumps ATPases(2) AT4G39080 79.070 1.09e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01368 K02154 - aip:107620414 256.914