Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01334 ATGGCAACCACGTTGACTTGGAGGTTAGCTGCCAACAATGGCACCACCCTCGCTGCTAATGACCTGGAAAGAAATGGTGATGGGAAGGTTCAAGATACAGAGTCTCCAACACCCCATTCTGTTTTGAAGATGGGACTGAGAGAACGCAGTAGCAGCATGGAGGATCCAGATGGGACATTGGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGTAAGAGTTCATCTTCTATGCTAGAGAAAGAGAACTCCCTGAAGCAGTTATCGGAGCTTATTGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAAGCAGTTCCAGTGCTTGTTTCCCTTCTCCGGTCAGGATCCTTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCCCTTTGTAAAGAAAATGAGCTGAGGGTTAAAGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTAGTTTACTCAAGTCCAGTTCTGGTGAAGGTCAAGTAGCTGCTGCCAAGACTATTTATGCTGTCTCTCAAGATGGTGCCAAAGATCATGTTGGTTCAAAAATTTTTTCAACTGAAGGTGTTGTGCCAGTTCTTTGGGAACAATTGAAAAAGGGCATGAAGACTGGAAATGTAGTTGACAATTTATTGACTGGAGCATTGAAGAATCTCTCCAGCAGTACAGAGGGATTCTGGAATGCCACAGTACAAGCTGGAGGAGTGGACATATTAGTGAAGTTACTAACAACAGGACAGTCTGGCACTCAAGCCAATGTGTGCTTTTTACTTGCGTTCTTGATGATGGAGGATGCATCTATTTGTTCAAAAGTGTTGGCAGCAGAGGCAACAAAACATCTTCTCAAACTATTAGGCCCTGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCCGGGGCGCTCAAATCTCTGTCGGCTCAGTGCAAAGATGCAAGACGAGAGATAGCCAATTCTAATGGCATTCCTACTCTGATTAATGCTACCATAGCGCCTTCGAAAGAGTTCATGCAAGGAGAGCATGCTCAAGCATTACAGGAAAATGCTATGTGTGCCCTAGCGAACATCTCTGGTGGCTTGTCTTCTGTGATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACTTCAGCTGCACAAATTGCTGACACTTTAGGGGCTTTAGCTTCGGCTCTTATGATATATGATGAAAAGGCAGAATCCACAAGAGCATCGGATCCTTTGGCAGTTGAGCAGACATTACTCAATCAGTTTAAGTCTCAGTCTCCCTTCCTTGTGCAGGAACGGACCATTGAAGCGCTGGCTAGTTTATATAGTAATCCCATACTATCAATTAAACTTACAAATTCCGATGCAAAGCGTTTGCTAGTTGGTTTAATAACAATGGCTGCCAGTGAAGTGCAAGACGAGCTTCTAAAAGCTCTCTTGACACTGTGCAATAGTGGAGGCAGTTTATGGCGTGCACTTCAAGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTTTGGGACTTTCATCAGAACAGCAGCAAGAATGTGCTGTTGCCCTACTATGCCTTCTGTCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCGCTTGTGCAAATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGATTCAGCAACAATCCTTAGAAACCTATGCAATCATAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCAGTTCCTGCATTGTTGTGGCTATTAAAGAATGGAAGCGCAAATGGGAAGGAGATTGCTGCAAAAACCTTGAATCACTTAATCCATAAATCTGATACAGCAACTATTAGCCAGCTTACAGCACTATTGACAAGTGATCTACCAGAATCTAAGGTTTATGTCTTAGATGCCTTGAGAAGTATGCTTTCTGTTGTTCCTCTTAGTGATATTTTACGCGAAGGTAGTGCTGCGAGTGATGCAATTGGTACAATGATAAAAATTTTGAGCTCAAGCAAGGAAGAAACTCAGGCGATGTCTGCAGCAGCTCTAGCAGGACTTTTTGAAACAAGAAAAGATGTGCGTGAAAGCAGCATTGCTGTTAAAACTCTTCTATCAGTCTCGAAATTGCTTAATGTCGAATATGAAAGTGTCTTGATGGAAACCTCACACTGCCTGGCTGCAATATTTCTTTCAATCAAAGAGAACAGGGATGTAGCTGCTATTGCTAGAGATTCATTGTCTCCATTGATTGCACTAGCCAACTCCTCAGTTTTGGAAGTAGCAGAGTTGGCAACATGTGCTGTGGCAAATCTTATTTTAGATGGTGAAATTGCAGAGAAAGCTGTTGCAGAAGAGGTTATCATGCCTGCTACAAGAGTATTACGTGAAGGCACAATTTCTGGAAAAACACATGCAGCAGCAGCAATTGCTCGCCTCTTACATTCTAGGCAAGTTGATTATGCTGTAACAGAATGTGTGAATCGTGCTGGTACTGTTCTTGCGTTAGTTTCTTTTCTAGATTCTGCCATTAATGGATCTGCTGCCACATTGGAGGCTCTAGATGCACTCGCTATTCTGTCCAGATCAGAAAAAACCAGCGGAAAGAGTAAACCTGCATGGACAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCTATAGTCCTGTCTATTGCTGATTCTACACCAACATTACAGGATAAAGCTATTGAGATATTATCACGACTATGTAAGGATCAGCCTCTTGTCTTAGGGGACACTGTTGCTACTGCATCTGGATGTATATCTTCAATAGCTAAGAGGATAATTTCTACTTCCACAAATGTAAAAAAAAAAATTGGAGGAGCTGCAGTGCTTATTTGTGCTGCAAAAGTAAATCATCAGAAACTGCTGGAGGATCTGAACTTATCAAACTTGTGTGCTGGTCTTGTTCGATCACTTGTTGATATGCTTAATTCTTCAGACTCATCTTTGGCCAATCAGGGAGATGACAATAGGGAAGTCATCAGCATTTGCCGGCATACAAAAGAAGAATCCAGTGATGATCAATCAAACAGTGGCACTGCCATTATATCTGGTGCCAACTTAGCTATATGGTTACTGTGTATCCTTGCTTGTCATGATGAAAACAGTAGAATTGCAATAATGGAGGCTGGAGCGATTGAGGTTCTCTCAGAGAAGATCTCAAATTATTTCTCACAGTATAGTCAGATTGATGATAAAGAAGACAGCAGCATGTGGATTTGTGCTTTGTTGTTGGCAATATTATTCCAAGATAGAGATATTATACGTGCACATGCAACCATGAAATCTATACCAGCTCTTGCCAATTTGCTGAAGTCAGAAGAATCAGCAAACAAATACTTTGCAGCACAATCAATAGCTAGTCTGGTCTGTAATGGCAGCAGGGGAACACTTCTTTCTGTGGCTAATTCTGGGGCAGCAAATGGACTCATCACGTTGCTTGGCTGTGCCGATACTGATATTCAGGATCTTCTGGAATTGTCCGAAGAATTTTCTTTGGTACGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATCAGAGTTGGTGCCACTTCTCGAAAGGCAATACCTGCCCTCGTTGATCTGCTTAAACCAATTCCAGATCGTCCAGGAGCACCATTTTTAGCACTTGGGCTTTTGACTCAGCTTGCTAGAGATTGTCCATCAAATAAGATTGTAATGGTAGAGTCTGGGGCCTTGGAGGCAATAACTAAATATCTTTCGCTAGGTCCTCAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTGGCAGTGCTGAGATACGGAGACATGAATCTGCGTTTGGTGCTGTCACTCAACTTGTGGCTGTCCTGCGTTTAGGAGGAAGAGCTGCAAGGCATAGCGCTGCAAAAGCCTTAGAAAGTTTATTCTCTGCTGACCATATTAGAAATGCAGATACTGCTCGACAAGCTGTTAAACCCTTGGTAGAGATTCTTAATACAGGTCTAGAGAGGGAGCAGCACGCTGCAATTGCTGCATTGGTTAGGTTACTGAGTGAAAACCCTTCAAGAGCACTCGCTGTTGCAGATGTGGAGATGAACGCAGTGGATGTTCTTTGCAGGATCCTTTCATCAAATTGTTCAATGGACCTCAAAGGGGATGCTGCTGAATTGTGTTGTGTTCTTTTTGCAAATACAAGGATTCGGTCTACGATGGCTGCTGCACGCTGTGTGGAACCTCTGGTCTCTCTCCTTGTAAGTGAGTTTGGTCCAGCTCAACACTCTGTTGTTCGGGCATTGGATAGGCTTGTTGATGATGAGCAACTCGCTGAATTAGTTGCTGCACATGGTGCAGTTATCCCTCTTGTTGGCCTACTGTATGGTAGGAACTATGTTCTTCATGAGGCCATATCGAGAGCTCTAGTCAAGTTAGGAAAAGACAGGCCTGCTTGTAAAGTGGAAATGGTGAAAGCTGGAGTTATTGAAAGCATACTTGACATCCTTCTTGAAGCACCTGACTATCTATGTGCAGCTTTTTCGGAACTCTTGCGGATATTGACAAATAATGCTAGCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTAGATCCCCTGTTTTCTATGCTGACGAGACAAGAATTTGGGCCTGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAGCATCCACAGTGTCGTGCTGATTACACGTTGACTTCCCACCAAGCTATTGAGCCACTTATCCCTTTGCTTGATTCTCCAATATCAGCAGTACAACAATTGGCTGCTGAACTTCTCTCACATCTACTTCTAGAAGAACACCTTCAGAAAGATCCAGTGATTCAACAAGTAATTGGCCCGCTCATAAGAGTTCTTGGTTCTGGTATACACATTTTGCAGCAGAGAGCTATGAAGGCCCTTGTTAGTATTGCACATATATGGCCTAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAAATTTCCAAAGTGATATTGCAAGCTGATCCTTCCATTCCCCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTGGCATGTGTTCTGCAATTTAGTTCTGAATTCTACTTGGAGGTGCCTGTTGCTGTTTTAGTAAGGTTGCTTCGATCTGGCTCAGAGAGCACAGTTGTTGGTGCATTAAATGCCCTTCTTGTGTTGGAAAGTGATGATGGAACCAGTGCAGAAGCAATGGCTGAAAGTGGTGCCATAGAAGCTCTCTTGGAGCTCCTAAGATCTCATCAATGCGAGGAAACTGCTGCAAGACTCTTGGAAGTATTGCTAAACAATGTGAAGATCAGAGAAACCAAAGTTACTAAATCAGCCATCTTACCATTATCCCAGTACCTCTTGGATCCACAAACCCAAGCACAGCAGCCAAGGCTATTAGCAACTTTGGCTCTTGGTGATTTATTCCAGAATGAAAGTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTCGAGGAGCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAACCTTGTAATGTACAGTAGATCAAATAAAAGAGCAGTTGCAGAGGCCGGTGGTGTTCAGGTGGTTCTAGATCTGATAGGTTCTAGTGATCCTGAAACATCTGTTCAGGCTGCGATGTTTATAAAACTTCTGTTTTCAAATCACACTATTCAGGAGTATGCTTCCAGTGAAACAGTCAGAGCAATAACCGCTGCTATTGAGAAGGATTTGTGGGCTACTGGAACTGTGAATGAGGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCACGATTGAGAGCAACTGAACCGGCAACTCTTAGCATTCCTCATCTCGTTACATCCTTAAAGACAGGCTCAGAGGCTACACAGGAAGCTGCCTTAGACACACTCTCTCTGCTCAGGCAAGCTTGGACTGCATGCCCGGCAGAAGTTTCAAGAGCTCAATCCATAGCAGCTGCAGATGCTATTCCTTTGCTACAATACTTAATCCAATCAGGCCCACCTCGGTTTCAGGAAAGGGCAGAATTCTTGTTGCAGTGTTTGCCTGGTACTCTGGTGGTGATCATCAAGCGTGGTAATAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTATTGCAAGCTGACACTTGGCAATACTCCTGCACGGCAGACCAAGGTGGTCTCAACTGGCCCCAATCCGGAATGGGACGAAAGCTTTTCATGGGCCTTTGAAAGTCCTCCTAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAATGGGGAAGAGTTCATTTGGAAAAGTGACCATTCAAATTGATCGGGTGGTAATGCTAGGAGCAGTATCTGGAGATATCAAGCTTTGGATCTGGAACATAGGactctcatgcgtcgacgaaggaataagattcatgatattttcctggaagatggaacttggactaatgatatag 6483 0.4294 MATTLTWRLAANNGTTLAANDLERNGDGKVQDTESPTPHSVLKMGLRERSSSMEDPDGTLASVAQCIEQLRKSSSSMLEKENSLKQLSELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLSLLKSSSGEGQVAAAKTIYAVSQDGAKDHVGSKIFSTEGVVPVLWEQLKKGMKTGNVVDNLLTGALKNLSSSTEGFWNATVQAGGVDILVKLLTTGQSGTQANVCFLLAFLMMEDASICSKVLAAEATKHLLKLLGPGNDAPVRAEAAGALKSLSAQCKDARREIANSNGIPTLINATIAPSKEFMQGEHAQALQENAMCALANISGGLSSVISSLGQSLESCTSAAQIADTLGALASALMIYDEKAESTRASDPLAVEQTLLNQFKSQSPFLVQERTIEALASLYSNPILSIKLTNSDAKRLLVGLITMAASEVQDELLKALLTLCNSGGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVPLSDILREGSAASDAIGTMIKILSSSKEETQAMSAAALAGLFETRKDVRESSIAVKTLLSVSKLLNVEYESVLMETSHCLAAIFLSIKENRDVAAIARDSLSPLIALANSSVLEVAELATCAVANLILDGEIAEKAVAEEVIMPATRVLREGTISGKTHAAAAIARLLHSRQVDYAVTECVNRAGTVLALVSFLDSAINGSAATLEALDALAILSRSEKTSGKSKPAWTVLAEFPKSISPIVLSIADSTPTLQDKAIEILSRLCKDQPLVLGDTVATASGCISSIAKRIISTSTNVKKKIGGAAVLICAAKVNHQKLLEDLNLSNLCAGLVRSLVDMLNSSDSSLANQGDDNREVISICRHTKEESSDDQSNSGTAIISGANLAIWLLCILACHDENSRIAIMEAGAIEVLSEKISNYFSQYSQIDDKEDSSMWICALLLAILFQDRDIIRAHATMKSIPALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAANGLITLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEAITKYLSLGPQDATEEAATDLLGILFGSAEIRRHESAFGAVTQLVAVLRLGGRAARHSAAKALESLFSADHIRNADTARQAVKPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMDLKGDAAELCCVLFANTRIRSTMAAARCVEPLVSLLVSEFGPAQHSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEAISRALVKLGKDRPACKVEMVKAGVIESILDILLEAPDYLCAAFSELLRILTNNASIAKGPSAAKVVDPLFSMLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPISAVQQLAAELLSHLLLEEHLQKDPVIQQVIGPLIRVLGSGIHILQQRAMKALVSIAHIWPNEIAKEGGVVEISKVILQADPSIPHALWESAASVLACVLQFSSEFYLEVPVAVLVRLLRSGSESTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQPRLLATLALGDLFQNESLARTSDAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDTLSLLRQAWTACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQERAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPARQTKVVSTGPNPEWDESFSWAFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGDIKLWIWNIGLSCVDEGIRFMIFSWKMELGLMI 2160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01334 2160 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1197 1241 IPR000225 GO:0005515
Aip10g01334 2160 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Aip10g01334 2160 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Aip10g01334 2160 SUPERFAMILY ARM repeat 1195 1606 IPR016024 -
Aip10g01334 2160 SUPERFAMILY ARM repeat 342 642 IPR016024 -
Aip10g01334 2160 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2131 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Aip10g01334 2160 SUPERFAMILY ARM repeat 659 987 IPR016024 -
Aip10g01334 2160 CDD C2 2033 2133 - -
Aip10g01334 2160 Coils Coil 297 324 - -
Aip10g01334 2160 Gene3D - 651 868 IPR011989 -
Aip10g01334 2160 Gene3D C2 domain 2028 2131 IPR035892 -
Aip10g01334 2160 SMART arm_5 817 859 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1399 1439 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 567 607 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 94 135 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1230 1271 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 311 360 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 525 565 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1858 1898 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1731 1770 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 733 771 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1440 1480 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1567 1608 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 1185 1228 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 268 309 IPR000225 GO:0005515
Aip10g01334 2160 SMART arm_5 136 176 IPR000225 GO:0005515
Aip10g01334 2160 Pfam C2 domain 2031 2120 IPR000008 -
Aip10g01334 2160 Gene3D - 1177 1319 IPR011989 -
Aip10g01334 2160 SUPERFAMILY ARM repeat 75 393 IPR016024 -
Aip10g01334 2160 ProSiteProfiles C2 domain profile. 2012 2133 IPR000008 -
Aip10g01334 2160 Gene3D - 413 650 IPR011989 -
Aip10g01334 2160 SUPERFAMILY ARM repeat 1581 2029 IPR016024 -
Aip10g01334 2160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2031 2121 IPR035892 -
Aip10g01334 2160 Gene3D - 879 1172 IPR011989 -
Aip10g01334 2160 Gene3D - 1681 2027 IPR011989 -
Aip10g01334 2160 Gene3D - 1320 1680 IPR011989 -
Aip10g01334 2160 MobiDBLite consensus disorder prediction 19 38 - -
Aip10g01334 2160 Gene3D - 49 410 IPR011989 -
Aip10g01334 2160 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2131 - -
Aip10g01334 2160 SUPERFAMILY ARM repeat 1026 1160 IPR016024 -
Aip10g01334 2160 SMART C2_3c 2032 2128 IPR000008 -
Aip10g01334 2160 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01334 Aip-Chr10 21844794 21854848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01334 496 620 U-box Gene Family AT3G46510 32.540 1.40e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01334 - - gmx:100816765 3623.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03612 03 117215999 117225319 Aip10g01334 10 21844794 21854848 PCT