Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01322 ATGTTGTGTAGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAAGCTGTCATAAGGAGGCTATCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAATATATTGAAAGTTATATTGGTAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGGTTAGGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTACTCCAGCATTAAGTGAAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCGAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCGATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATTATTAGAGGAGAAAGATAA 462 0.4048 MLCRVLVLAATNRPFDLDEAVIRRLSRRLMVNLPDAPNRANILKVILVKEDLSSDIDFDAIANMTEGYSGSDLKVREHAAALAEGRPTPALSESSDIRSLNMEDFKHAHQQVCASVSSESINMTELSRWNDLYGEGGSRVKKALSYFIIRGER 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01322 153 ProSitePatterns AAA-protein family signature. 5 24 IPR003960 GO:0005524|GO:0016887
Aip10g01322 153 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 4 148 - -
Aip10g01322 153 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 4 148 - -
Aip10g01322 153 Gene3D - 4 123 IPR027417 -
Aip10g01322 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 124 IPR027417 -
Aip10g01322 153 Gene3D - 34 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01322 Aip-Chr10 21528308 21529592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01322 5 73 Calmodulin-binding Proteins AT3G56690 38.356 2.61e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01322 - - adu:107480734 255.758