Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01320 ATGGCTTCTTCAGCAATGATACCTACCTGCATATCCTCGTCAAAGGATATGCAGGTCGACATTGAGAAGAACCAAAGCCATGTAAGGTGTCAGTGGGTACTCAACCCTCCTGAGCCACCGAGTCCTTGGCGCATGATCACGGACTCAGTGGAAAAAAGTATCTTGCGTTGGCGCAAGAACTTTTCTACGCTGGGACATGAATCATGGGCCAGGGTCATGTTTTCAACTTTGCAGAGGATTTTTCCGATCCTTGTGTGGGGAAGAAGTTACACTGCCACTAAATTCAGGAAAGACTTGCTTGCTGGTCTCACTATTGCGAGTCTCTGTATTCCCCAGAGCATTGGGTACGCGACCTTAGCAAACCTTGATCCTCAATATGGCCTTTATACAAGTGTTGTGCCACCGCTGATCTATGCCGTAATGGGAACCTCTCAAGAGATAGCAATGGGGCCAGTGGCGGTGGTGTCGTTGCTCTTGTCTTCGATGGTTCAGAAATTAAGAGATCCTGTTTTTGATCCAATCGCTTACACCAAACTCGTCTTGCTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGCCTTTTCAGGCTGGGGTTCCTTGTGGATTTCCTGTCACACGCAGCAATAGTTGGATTTGTGGGAGGAGCAGCCATTGTTATTGGCCTTCAACAGTTGAAGGGCCTCTTAGGAGTTTCTCACTTTACTACCAAAACCGACATTATCTCTGTCATCAAAGCTGTTTGGCAAGCAACTCATCATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCATTCCTGGTCTTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCCCCTCTCATATCAGTTGTAGTATCAACTTTACTGGTTTTTGTGACACATGCTGATAAGAATGGAGTTAAAATTGTAAAACATGTCAAAGGGGGATTAAATCCAAGCTCCATTCATATGTTGGATTTCAATAATCCATATGTTGGAGAAGTCGCCAAAATTGGACTAATCCTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATCAAAGGGTACCAACTTAATGGGAACAAGGAAATGGTGTCAATTGGAATCACCAACATCATAGGATCTTTCACCTCTTGCTATGTTGCTACTGGTTCATTCTCCCGAACGGCGGTGAATTATGCAGCTGGATGTGAAACATTGGTGTCAAACATAGTGATGGGAATGACAGTGTTGATATCGTTGCAGTTCATGACAAAGCTTTTGTATTACACACCAACTGCCATTCTTGCTTCGGTCATCCTTTCAGCACTGCCAGGCCTCATAGATATCAATGAAGCTCTCAGAATATGGAAGCTTGATAAGTTTGACTTTCTTGCTTGTCTTAGTGCCTTCTTTGGTGTACTCTTTGCATCTGTGGAGATTGGTCTTCTTGTTGCGGTGGCAGTATCGTTTTCAAAGATAATTGTGATATCAATACGACCAGGGACAGAAACTCTAGGAAAATTACCGGGAACCGATTTGTTCGGTGATGTTAATCAGTATCCAATGGCTGTTAAGATCCCTGGCCTTCTCATTATACGTCTTAAGTCTGCCTTGCTTTGCTTTGCAAATGCCACTTTCGTTAGAGAAAGGATCATGAAATGGGTCAGTGAGGAAGAAGAATCGATGGATGACAAGGGAAATGCAATAAGCCAAATTCAATTCGTAATCCTTGACATGTCCAATTTGGTGAACATTGACACATCTGGAATTGCTGCTCTTGAGGAACTGCACAAGAGTTTGTCCTCACATAGGAAGCAGTTAGCCATTGCGAACCCAAGGTGGCAAGTGATTCACAAGCTAAAGGTATCAAACTTTGTCAACAAAATCAATGGCAGGGTCTTTCTCACTGTTGAAGAAGCTGTTAGCTCCAAGATCCAGTGCTGA 1968 0.439 MASSAMIPTCISSSKDMQVDIEKNQSHVRCQWVLNPPEPPSPWRMITDSVEKSILRWRKNFSTLGHESWARVMFSTLQRIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLDPQYGLYTSVVPPLIYAVMGTSQEIAMGPVAVVSLLLSSMVQKLRDPVFDPIAYTKLVLLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGVSHFTTKTDIISVIKAVWQATHHPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLISVVVSTLLVFVTHADKNGVKIVKHVKGGLNPSSIHMLDFNNPYVGEVAKIGLILAVVALTESVAVGRSFASIKGYQLNGNKEMVSIGITNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLISLQFMTKLLYYTPTAILASVILSALPGLIDINEALRIWKLDKFDFLACLSAFFGVLFASVEIGLLVAVAVSFSKIIVISIRPGTETLGKLPGTDLFGDVNQYPMAVKIPGLLIIRLKSALLCFANATFVRERIMKWVSEEEESMDDKGNAISQIQFVILDMSNLVNIDTSGIAALEELHKSLSSHRKQLAIANPRWQVIHKLKVSNFVNKINGRVFLTVEEAVSSKIQC 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01320 655 ProSiteProfiles STAS domain profile. 547 652 IPR002645 -
Aip10g01320 655 PANTHER SULFATE TRANSPORTER 19 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip10g01320 655 Gene3D STAS domain 507 653 IPR036513 -
Aip10g01320 655 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 19 653 - -
Aip10g01320 655 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Aip10g01320 655 Pfam STAS domain 528 648 IPR002645 -
Aip10g01320 655 SUPERFAMILY SpoIIaa-like 532 650 IPR036513 -
Aip10g01320 655 TIGRFAM sulP: sulfate permease 82 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip10g01320 655 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01320 Aip-Chr10 21423110 21449166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01320 3 651 Inorganic Solute Cotransporters AT5G10180 66.410 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01320 K17469 - gmx:100817831 1017.68