Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01319 ATGGTAGCTTCATCAGTAAGCAGTGCCGCAGTGAGTTGCACGTTGGAAGAGATGTTGGAATCTAAAGAGAAAGAAATGTACCAGCAGCAGTGGGTGCAAAATGCACCACACCCGCCTTGTTTTTTTCGAGAGGTATTCGAAAACGTTAGGGACACAATTTTGCCGCCTAGTAACAGCAAGAATGTGTGGTCAACTCTCGTTGTCAACGACAACCAACAACCTTTGTACAAAAGAGCGTTGGTGTTGTTGACGGAGATTTTTCCCATCCTTGCTTCTCTAAGAGGATACAATGCTCACAAGTTCAAATTCGATCTCATGGCGGGTATAACCGTTGCAAGTCTCGCCATTCCTCAGTGTGTAGGATTCGCTACTTTGGCTCAGCTAAGTCCCGAATATGGTTTATTGGGGTTCTTGGCAGCAGCTGCCGTAGGCATTGGAGCATATCAGTTTATAGTGTTGTTAGGAATCAATAAATTCACTAACAAATCTGACTTGATTTCTGTGATCAAAATATTTTGGACATCTTTATTCAAGGATCGATCACAGTGGCATCCTTACAGCTTTACTCTTGGATTCTCATTTCTTTGTTTCATCCTATTTGCCAGATTCATGGGGAGAAGGAACAAGAAACTGTTCTGGTTGCCAACAATTGCTCCTCTGCTTTCAGTTATTGTATCTTCTATTGTTGCATATACAGTGAATTCTCATCAAATAAATGTGAAGGACTACAAAGTTGATGTGTTAGGAGAAATCAAAGGAGGTAGCTTGAACCCAATCTCATTATTGCATCTCAACCTTAGTGACAATTTTTTGGCTCCATTGATCAAAACAGGGTTAACCGTTGCTGTTATTTCACTCACGGAAACTATTGCCGTTGGTAGGTCATTTGCATCCATAAGAGGATACAATCTTGATCCCAATAAAGAAATGATATCCCTGGGTTTAACCAACATTGTTGGATCTTTCACGTCTTGTTACGTTGCATCTGGTTCACTTTCACGCACTGCTCTAAATTATAGTTCAGGGGCTGAAACAACGGTGTCAAGCATAGTGATGGCATTGACGGTTCTAATATCACTGAAATTCTTGACGAGGCTATTGTATTACACTCCAAAAGCAATCTTAGCAGCAATAATTATATCGATAGTGCCTGGTCTTATTGACATTCAAAAAGCATATCAGATTTGGAAGGTTGATAAACTAGACTTTCTTGCTTGCGCTGCAGCCTTTTTTGGGGTCCTCTTTGCCTCTGTAGAGATGGGCCTTGCAATTGCGGTGACAATATCATTTGCAAAGTTAATTCTGGTGTCAATTCAACCTGGAATAACGGTTCTTGGAAGGCTTCCTGGAACAGATGGATTTGGTGACATTGAGCAATATCCAATGGGCCTCTCCATTCCTGGCCTTCTTATTCTTTCTCCAAAATCCTCCTTCCTTTCTTTTGCAAATGCAACTCTTGTCAGAGAAAGGATTGAGAGATGGGTGAATGATGGACACGTTGAGGAGGGCGAGGGAGGAAGCAATTTAAAATTCATCATTCTTGATTCCTCAGGTCTTACGAATATTGACACAGCGGGAATTGCTTCTTTGGAGGAACTGAACAAGAATTTGACTTCACATGGAGTAAAGTTGGTGATAGCTAACCCAAGGTGGCAAGTAATCCACAAGCTAAGAGTAGGTGACTTTGTGAGCAAAATTGGAGGAAGAGTTTTCGTTTCTGTGGGTGAAGCTGTAGATGCATGTCTTGGTCTTGGTGCTGCCAAAATGGCTAATACTGTATAA 1782 0.4147 MVASSVSSAAVSCTLEEMLESKEKEMYQQQWVQNAPHPPCFFREVFENVRDTILPPSNSKNVWSTLVVNDNQQPLYKRALVLLTEIFPILASLRGYNAHKFKFDLMAGITVASLAIPQCVGFATLAQLSPEYGLLGFLAAAAVGIGAYQFIVLLGINKFTNKSDLISVIKIFWTSLFKDRSQWHPYSFTLGFSFLCFILFARFMGRRNKKLFWLPTIAPLLSVIVSSIVAYTVNSHQINVKDYKVDVLGEIKGGSLNPISLLHLNLSDNFLAPLIKTGLTVAVISLTETIAVGRSFASIRGYNLDPNKEMISLGLTNIVGSFTSCYVASGSLSRTALNYSSGAETTVSSIVMALTVLISLKFLTRLLYYTPKAILAAIIISIVPGLIDIQKAYQIWKVDKLDFLACAAAFFGVLFASVEMGLAIAVTISFAKLILVSIQPGITVLGRLPGTDGFGDIEQYPMGLSIPGLLILSPKSSFLSFANATLVRERIERWVNDGHVEEGEGGSNLKFIILDSSGLTNIDTAGIASLEELNKNLTSHGVKLVIANPRWQVIHKLRVGDFVSKIGGRVFVSVGEAVDACLGLGAAKMANTV 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01319 593 Gene3D STAS domain 439 582 IPR036513 -
Aip10g01319 593 Pfam STAS domain 466 577 IPR002645 -
Aip10g01319 593 ProSiteProfiles STAS domain profile. 479 581 IPR002645 -
Aip10g01319 593 SUPERFAMILY SpoIIaa-like 467 581 IPR036513 -
Aip10g01319 593 PANTHER EARLY NODULIN-70 134 584 - -
Aip10g01319 593 TIGRFAM sulP: sulfate permease 134 575 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip10g01319 593 Pfam Sulfate permease family 134 408 IPR011547 GO:0016021
Aip10g01319 593 PANTHER SULFATE TRANSPORTER 134 584 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip10g01319 593 PANTHER SULFATE TRANSPORTER 16 134 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip10g01319 593 CDD STAS_SulP_like_sulfate_transporter 460 571 - -
Aip10g01319 593 PANTHER EARLY NODULIN-70 16 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01319 Aip-Chr10 21345943 21355540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01319 95 584 Inorganic Solute Cotransporters AT5G10180 52.024 3.43e-167 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01319 K17469 - gmx:100817841 609.757