Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01280 ATGGCCAGCAACGGAGAGCAGAACCAAACTTCTGAAGCTGGAAGGCACCAAGAAGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTATACCAGTACATTCTGGAAACCAGCGTGTACCCAAGAGAACATGAAGCCATGAAAGAATTGAGAGAATTGACAGCAAAGCACCCATGGAACATCATGACAACCTCTGCAGATGAAGGACAATTTTTGAACATGCTCCTTAAGCTCATCAATGCCAAGAATACCATGGAAATCGGTGTCTACACCGGTTACTCGCTTCTTGCCACTGCCCTTGCTCTTCCTAAAGATGGAAAGGAGAACTACGAATTGGGTCTGCCAGTAATTAAAAAAGCCGGTGTTGACCACAAAATTACCTTCAAAGAAGGACCAGCTCTCCCTGTTCTCGACGAATTGGTTAAAGATGAGAAGAACCATGGAAGCTACGACTTCATTTTCGTGGACGCAGACAAGGACAACTACCTGAACTACCATAAGAGGCTCATCGATTTGGTGAAGGTAGGTGGTGTGATCGGCTACGACAACACCCTATGGAATGGGTCTGTGGTCGCACCTGCCGATGCACCCATGAGGAAGTACGTTAGGTACTACAGAGATTTTGTGTTGGAGCTTAACAAGGCCTTGGCTGTGGACCCCAGAATTGAGATCTGCATGCTCCCGGTTGGAGGTAGAACTGCAGCAAGAGGACCTTTAAGATTGTGTTCTGATATTGTCATTGGAAAAGCTCAATTATTTAATGGTCAATTAGTATTGACTGTTAGTTCTTTGCAAGCCACACTTTCTGGTTCTACCTTTCAATTCATTGATTTCTATACTGCACTGCTCAAGATCATACAAAATCCTTTTAGTTCAGGTTTTTCACCATGGAAGAACATCGCTTTGGTAGCATCTGCCCGAAAGCAGGAGTTGGCTGTCCCTGAGGATAGCAGTCTCCTGTATAAGACAGCAGACAAGAAATCTGCTATCGAAGGGAGCCGCAAACTGCAGAGCGCGTTGGCGCTTCTGACAAATTCACTGGGAAATTACCTGAGTTCTTTTGTTGTCACAATTGTTGCTCGACTAACAAGAAAGGACGGAAGTCATGGATGGCTACCAGATAATTTGAACGACCCTCAACTTCGGTGTGGAGCATCATCGCTCCTTTTCTACACCAACATTCCCCCGGGCCTCACCTACCACTCTGTCTCTTCATTACTACTCCTAACACCATCACCATGCATATTCACTTTCTTTCTCACCATTTTTTAA 1272 0.4536 MASNGEQNQTSEAGRHQEVGHKSLLQSDALYQYILETSVYPREHEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPKDGKENYELGLPVIKKAGVDHKITFKEGPALPVLDELVKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPADAPMRKYVRYYRDFVLELNKALAVDPRIEICMLPVGGRTAARGPLRLCSDIVIGKAQLFNGQLVLTVSSLQATLSGSTFQFIDFYTALLKIIQNPFSSGFSPWKNIALVASARKQELAVPEDSSLLYKTADKKSAIEGSRKLQSALALLTNSLGNYLSSFVVTIVARLTRKDGSHGWLPDNLNDPQLRCGASSLLFYTNIPPGLTYHSVSSLLLLTPSPCIFTFFLTIF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01280 423 Pfam O-methyltransferase 36 230 IPR002935 GO:0008171
Aip10g01280 423 Gene3D Vaccinia Virus protein VP39 22 235 IPR029063 -
Aip10g01280 423 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 231 IPR029063 -
Aip10g01280 423 Gene3D MFS general substrate transporter like domains 318 391 IPR036259 -
Aip10g01280 423 PANTHER O-METHYLTRANSFERASE-RELATED 4 231 - -
Aip10g01280 423 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 241 IPR002935 GO:0008171
Aip10g01280 423 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 4 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01280 Aip-Chr10 20336823 20340896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01280 4 236 Monolignol Biosynthesis Gene Families AT4G34050 84.298 1.88e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01280 K00588 - gmx:100811247 431.409