Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01278 ATGGTTTCCACTGACCCAAAGTTCATTGACACAGTTTTCTGCAGGTTTTCTGTGCAGGAATATGGCAAGTTTCGTGTTATGCCTATTAGCGAAGCTGCTGTAGCACTGGCTGAAAGCGGAAAAATTGGTGCCTTAAATTTGCTGTTTAAGCGTCATCCATATTCTTTATCTCCATTTATGTTGGAAATTTTATCTGCCATCCCAGAAACAGTTCCTGCCGAAACATATGTGCAGCTTCTTCCTGGGAGATCTCCTCCTGCTGGTGTTGCAGTGAGGAAAGATGATTGGGTTGAATGTGAGAAGATGGTTTGTTTCATTAACACATCAGTTGAAAGCCATGACATTCAAATCCAAGTCAAAACTGAACCACTTGTTAAACATTTTCTTGGAACTTTTTGGCCATCCATTGATGAGCTCACCAATTGGTATAAAACAAGAGCTAGATTCATGGATGATTTCAGTGGGCAGCTGGATAATTGTTTAAGCTTTCTTGAGTTTGCTCTTCACAAAGGTTTATCTGAGTTGCAGCAATTCCATCAGGATGTCCTATACTTGTATCAAATTATTTATTCTGATGACAGTGATGGCGAAACAAGCTCCAATATGAGTCTTGCCAAGTGGGGAGAGTTGTCGGACTATGATAAATTTAAATTTATGCTTAAGGGAGTCAAAGAGGAGAATGTAAATGAAAGACTACGCAATAGAGCTATTCCTTTTATGCATGGAAAGCTTCACATGGTATCTCTAAGCGGAGATATTAGTCTTCTTGATTCTGCAAATCAAAATATAGAGAAATCATTTCTGGTGAGATGGTTGACAGAAACTGCTTTGGTGAATAAATTGAACATATGCTTGGTGGTTATTGAGGAAGGGTGCAGAAACTTCCAAAGTAATGCCTATTTCAAAAGTGATGTTGAAGCTATTGACTGTGCTTTGCAATGCATATATTTGTCCACAGTTACAGATAGGTGGAGTACAATGGCATCCATTCTATCTAAATTACCTCCGCTACATGGTACTACAATTCAAATAGTGAACCTTGAGAGAAGACTTAGACTTGCTGAAGGTCATATTGAAGCTGGGAGACTCTTGGCATTCTACCAGGTCCCAAAGCCATTAAACTTTTTTGTGGAGGCTGAATCAGATGAGAAGGGTGTCAAACAGATCATTCGCCTTATTTTATCTAAATTTATTCGCCGTCAACCTAGCCGATCTGATAGTGAATGGGCCACTATGTGGCGTGATATGCAATACTTGAGGGAAAAAGCATTTCCTTTCCTGGACCTGGAGTATATTTTGGTTGAATTTTGCAGAGGGCTGCTCAAAGCTGGGAAGTTCTCTCTTGCAAGAAATTACTTGAAGGGTACGAGTTCAGTTTCTTTGGCATCGGAGAAGGCAGAAAGCCTTGTCATTCAAGCAGCTAGGGATTACTTTTTCTCAGCTTCAAGTCTTTCTTGTTCAGAAATCTGGAATGCTAGAGAATGCCTTAACCTATATCCAAATAGTGCAAATGTCAAGGCAGAGGCAGATATTATTGATGCACTTACAGTTAAGCTTCCCAACCTTGGGGTGAACATTCTGCCCATGCAGTTCAGGCAAATAAAGGATCCTATGGAGATTGTGAAAATGGCAATCACAAGTCCAACTGGAGCATATTTTCATGTTGATGAACTTATTGAAGTTGCTAGACTTCTTGGCCTGAGGTCTGCAAATGAAATAGCAGCTGTTGAGGAAGCTATTGCTAGAGAAGCTGCAGTTTCAGAACAAGAAACAAAAATGCTGGAACAAATTCTCGGGATGAAACTCACACAAGAGACCAAGAAATTAAGGCAGGCTTGTTTTAAAGTTAATTACAAAAGGAGGAAACTTTTGGCCTCCAAATCTTATTCATCATCACTTAGCTAA 1905 0.3979 MVSTDPKFIDTVFCRFSVQEYGKFRVMPISEAAVALAESGKIGALNLLFKRHPYSLSPFMLEILSAIPETVPAETYVQLLPGRSPPAGVAVRKDDWVECEKMVCFINTSVESHDIQIQVKTEPLVKHFLGTFWPSIDELTNWYKTRARFMDDFSGQLDNCLSFLEFALHKGLSELQQFHQDVLYLYQIIYSDDSDGETSSNMSLAKWGELSDYDKFKFMLKGVKEENVNERLRNRAIPFMHGKLHMVSLSGDISLLDSANQNIEKSFLVRWLTETALVNKLNICLVVIEEGCRNFQSNAYFKSDVEAIDCALQCIYLSTVTDRWSTMASILSKLPPLHGTTIQIVNLERRLRLAEGHIEAGRLLAFYQVPKPLNFFVEAESDEKGVKQIIRLILSKFIRRQPSRSDSEWATMWRDMQYLREKAFPFLDLEYILVEFCRGLLKAGKFSLARNYLKGTSSVSLASEKAESLVIQAARDYFFSASSLSCSEIWNARECLNLYPNSANVKAEADIIDALTVKLPNLGVNILPMQFRQIKDPMEIVKMAITSPTGAYFHVDELIEVARLLGLRSANEIAAVEEAIAREAAVSEQETKMLEQILGMKLTQETKKLRQACFKVNYKRRKLLASKSYSSSLS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01278 634 Pfam Secretory pathway protein Sec39 352 571 IPR013244 GO:0006890
Aip10g01278 634 Pfam Secretory pathway protein Sec39 33 332 IPR013244 GO:0006890
Aip10g01278 634 PANTHER NEUROBLASTOMA-AMPLIFIED SEQUENCE 16 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01278 Aip-Chr10 20289345 20292611 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01278 567 629 AtRKD Transcription Factor Family AT5G53040 41.538 3.19e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01278 K20473 - gmx:100805223 954.125