Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01270 ATGGCGCAGACAACCATAGATCCTCAATCGGCTCAGGTACCAAGTCATGTTAGCATTGACGATGTCTTGAAGATGGAATTCTTTACCCCTGGGGAAGCAAGAGAATTCTACATGAGTTATAGTAGGCTAAAAGTTTTTGCAATAAGGAAGAGTAAGAGAGTAAAAAATGCCAAAGGAGAGATCATTATATACACTTTTGTTTGCAACAGACAAGGGTTGATGCACAAGAAGTGGTTAGAGAAGTTGGATAGAAAAAGAGAGCAGAAGCCTGTAACTCGTTGCGGGTGTGTGGTAGAGATGAGGATCAAGAGGAATCATACTAATGGAAAATGGTTTGTTTCACAGTTTGTAGATGATCATAACCACACCCTTCTCTCAGAAAGGTTGATTGGATATTTGCCTTCACACAGGAATACGTCTGATGTAGAAATTGCTCAAATGAATAGCTTGAGGCAAGTTAGAATAAGTATCCCAAAGATATACCAGTCATTTGCGATGCAAGTTGGGGGCTTTAACTTAGTAAGGAATGATGAAAAACTGTTTTGGAGGTATGAGGTAGCGGATGGATCTCGTATGTGTGACCTTATATGGAGTGATGGCCAAAGTCAGGAAGATTATGAGGCATTCGGTGATGTACTCACCTTTGATGCGACCTATAGAAGGACCAAGTATAACCTTCTTGTCATTGTTTTGTCTAGGGTTAATCATCATAATCAAACATGCGGGTTTGCAACAGCAATGGTTTCATGCGAGTCACAGGATTCGTATAAATGGGTGCTGAGACGGTTTCTTGAATGCATGCGGGGAAAGGCCCCAAAGGCAGTTATAACTGATGAAGATCCTTCTATGAGGCTGGCTATTATGCATGTGTTTCCAGATGCGTATCATAGAATTTGCGCGTGA 903 0.4131 MAQTTIDPQSAQVPSHVSIDDVLKMEFFTPGEAREFYMSYSRLKVFAIRKSKRVKNAKGEIIIYTFVCNRQGLMHKKWLEKLDRKREQKPVTRCGCVVEMRIKRNHTNGKWFVSQFVDDHNHTLLSERLIGYLPSHRNTSDVEIAQMNSLRQVRISIPKIYQSFAMQVGGFNLVRNDEKLFWRYEVADGSRMCDLIWSDGQSQEDYEAFGDVLTFDATYRRTKYNLLVIVLSRVNHHNQTCGFATAMVSCESQDSYKWVLRRFLECMRGKAPKAVITDEDPSMRLAIMHVFPDAYHRICA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01270 300 Pfam FAR1 DNA-binding domain 35 125 IPR004330 -
Aip10g01270 300 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 174 IPR031052 GO:0006355
Aip10g01270 300 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 175 299 IPR031052 GO:0006355
Aip10g01270 300 Pfam MULE transposase domain 212 299 IPR018289 -
Aip10g01270 300 PANTHER OS02G0262500 PROTEIN 21 174 - -
Aip10g01270 300 PANTHER OS02G0262500 PROTEIN 175 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01270 Aip-Chr10 20145223 20146224 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01270 FAR1 3.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01270 - - ahf:112785456 506.523