Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01262 ATGTGGTGTAGCTTGGGAATTCTGGCCATTGGAGCATATGGCTTGCCTCAATTTCGACTGCGAGTGTTTTTATGGGGTACTAAACCTTCTGAGATACAACTTGCTGAACATGAACATGAGCTAATTGAAATGAATTACAACAGTGACAAACTTCGGCAATCATATAATGAACTCCTCGAATTCAAGATTGTATTGCAGAAGGTTTCGTCGTGCCTTACTAACTTGGAGGCAACTTTGGATGCGGGGTTGAGGCACCGCAATAAGGCACTAGCTTCTAGTGTTGTGAAGAGAACATTGCCACCACCCCCTGAAGATGCCAATGGTGCTGAAGCAACAAAATCAAATGGTGAGGAAGGTGGGGAACAAATGGAAACAAGTTGA 381 0.4383 MWCSLGILAIGAYGLPQFRLRVFLWGTKPSEIQLAEHEHELIEMNYNSDKLRQSYNELLEFKIVLQKVSSCLTNLEATLDAGLRHRNKALASSVVKRTLPPPPEDANGAEATKSNGEEGGEQMETS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01262 126 PANTHER VACUOLAR PROTON ATPASE A1 31 68 - -
Aip10g01262 126 PANTHER VACUOLAR PROTON ATPASE A1 67 93 - -
Aip10g01262 126 MobiDBLite consensus disorder prediction 93 126 - -
Aip10g01262 126 Gene3D Vaccinia Virus protein VP39 3 31 IPR029063 -
Aip10g01262 126 PANTHER VACUOLAR PROTON ATPASES 67 93 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip10g01262 126 PANTHER VACUOLAR PROTON ATPASES 31 68 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01262 Aip-Chr10 19891610 19893964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01262 31 74 Primary Pumps ATPases(2) AT2G28520 70.455 4.30e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01262 K02154 - adu:107474914 95.9005