Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01260 ATGACGCAGCAGAATGTGGTGGTGTGCAACACCAAATCCAGCGGAGACTTGTCGGTTTTTCCGGCGGCGAGTGCGGCGCAAAAGCCACCGGTGGGTGGAGGGTACATTTCCATTTCAAGGAGGCCAAGGAGGGTTCTCAAGAACCTTGAGATCAATGGAGATAACAGAATCAACGCTTTGGTTGAATCCATGAGAGCCTCTTCCCCAACTCATCTCAAGTCCACTCCTTCTTTGACTGAAGAACATAGTTCTTGGATTCTTCGCTATCCATCGGCATTGGACATGTTTGACGAAATTATGAATGGATCCAAGGGGAAGCAAATTGTGATGTTCCTTGACTACGACGGAACCTTGTCTCCTATAGTCGAGGACCCTGACCGTGCTTTCATGTCGAATTCGATGAGGAAAACGGTTAGAAAACTCGCAAGGTATTTTCCAACTGCCATAGTCACGGGAAGATGCAAAGACAAGGTCTACAATTTTGTTCGATTGGCAGAGCTATACTATGCTGGGAGCCACGGAATGGATATTAAAGGACCAACAAGAACTTCCAAGTACAACAGAGATAGTAACGCAGAAGGAGTTCTTTTTCAACCAGCAAGTGAATTTCTTCCCATGATAGATGAGGTGTACCAGCAATTGATGGACAAGACAAAATCAACTCCTGGAGCTAAGGTGGAGAACAACAAGTTTTGCGTCTCAGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGACTGAACTTTTGCATCAAGTTCAATCAGTGTTAAAAGAGTACCCTAAGCTTCGTCTTACACAAGGAAGGAAGGTAGTTGAGATTCGCCCCACTATTAAATGGGACAAAGGCAAAGCCTTGGAATTTTTACTAGAGTCTCTCGGATTTGCCAACTGTAATGATGTATTTCCAATTTATATTGGTGATGATCGAACCGACGAAGATGCTTTCAAGAAATTAAGAGATAGAGGCCAAGGTTTAGGGGTTCTTGTCTCAAAATTTCCAAAGGATACAAGTGCTTCTTACTCTCTTCAAGAACCTAACGAGGTGATGGAATTTCTTCAACGCTTGGTGGAATGGAGAAAGGTATCCATGCGAGCACGTTAG 1101 0.4378 MTQQNVVVCNTKSSGDLSVFPAASAAQKPPVGGGYISISRRPRRVLKNLEINGDNRINALVESMRASSPTHLKSTPSLTEEHSSWILRYPSALDMFDEIMNGSKGKQIVMFLDYDGTLSPIVEDPDRAFMSNSMRKTVRKLARYFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRTSKYNRDSNAEGVLFQPASEFLPMIDEVYQQLMDKTKSTPGAKVENNKFCVSVHFRCVDEKKWTELLHQVQSVLKEYPKLRLTQGRKVVEIRPTIKWDKGKALEFLLESLGFANCNDVFPIYIGDDRTDEDAFKKLRDRGQGLGVLVSKFPKDTSASYSLQEPNEVMEFLQRLVEWRKVSMRAR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01260 366 CDD HAD_TPP 109 350 - -
Aip10g01260 366 SUPERFAMILY HAD-like 109 358 IPR036412 -
Aip10g01260 366 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 3 364 - -
Aip10g01260 366 Gene3D - 108 198 IPR023214 -
Aip10g01260 366 Gene3D - 209 365 IPR023214 -
Aip10g01260 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 3 364 IPR044651 GO:0004805|GO:0005992
Aip10g01260 366 Pfam Trehalose-phosphatase 111 345 IPR003337 GO:0003824|GO:0005992
Aip10g01260 366 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 110 321 IPR006379 -
Aip10g01260 366 TIGRFAM T6PP: trehalose-phosphatase 106 356 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01260 Aip-Chr10 19774266 19778818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01260 104 355 Trehalose Biosynthesis Gene Families AT1G70290 25.926 2.84e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01260 K01087 - gmx:100794430 613.994