Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01256 ATGAATGGTGGAAGAGACACTGAAATTGCTATTGGAGCTTATCAACCCTCCTATTTGGCAACCAATAAAAATAGTGCAAGGGGCCAGATCCATCGCTTTCACTTGTCCTTGTGGTACGAGCATCTTGGCATATATAAAGAAACTTTCCTCAACCCTGAACTTGAAGGTTGTATTAGGAGGGTCCATCAACTTGCTCAAAACAATTGGAACAGATATACAGGACAACCATTATGCACTTGTGGCCACCTCCTGCGTTATCCCATTAACATTTCTCTTGATGGAAGTATCACACATGATCCTGAAATATTCCCCGACACCTATGCAAGAATTCGAGATGAGAGTAGTGCTGTTGATGATGTTGCTACTACTTGGAGTCGTCGCCAGAGCCAATGTTGTCACTGTGGCCGAGCTACATTGCCGCCAAGCTCTGCCTCTATTCTACCACCAAGCTCTATACCTCTATTCTACTTGTGA 474 0.4409 MNGGRDTEIAIGAYQPSYLATNKNSARGQIHRFHLSLWYEHLGIYKETFLNPELEGCIRRVHQLAQNNWNRYTGQPLCTCGHLLRYPINISLDGSITHDPEIFPDTYARIRDESSAVDDVATTWSRRQSQCCHCGRATLPPSSASILPPSSIPLFYL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01256 157 Pfam Phospholipase D C terminal 47 110 IPR024632 -
Aip10g01256 157 PANTHER PHOSPHOLIPASE D 1 116 IPR015679 -
Aip10g01256 157 PANTHER PHOSPHOLIPASE D ALPHA 3 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01256 Aip-Chr10 19684280 19686446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01256 1 110 Phospholipase D Gene Family (Wang group) AT1G52570 53.509 1.90e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01256 K01115 - ahf:112749031 233.802