Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01248 ATGTTTATCGTTGGAAGTGATACGAAGGTACAAATTTCATCCAACGATGCGGTCGATGGGCATGATGTGGAAAATAGTGACACTAACTCCAATGAGGATGTATTGATGTATGAAGATGTCATGAGTTTGAGTCCAAAGGATATATTGAAGAAGGTATTTCAAAGTGAGAAGTACGCTTATGAGTTCTACATGAGATTGGGAAAATGCCATAGATTCAGTGTTCGTAAAGGAGACTATGCGAAGGATGAAGCTGGGAATGTAATTAGGAGAAGATTCTTCTGCAATAGAACTGGTTTGAGGGATGAAAGACACTACAACAAGTTAGACAGGAAGAGATCACATAAGCCCGAGACACATACAAACTGCCAGGCATTGCTGTCTACATACCTTGATAAGAGTATGTCAAGTTGGAAGGTTCGAAAGGTCACACTCAGGCACAACCATGAGTTGACGCCTAGGGGGATGGTTCACATGATTCGTAATTTTTGGACTATATCTGGATCTTCAAAGTCTCACGTTGATGGCATGTATGCTTATGGTTCGCCAACGTCAAAGATGTTCGGGGTACATGGCTGTCATTGCAGGAGCATACTTGAGCTTGTTCAGAACCTGGAGTTACTTGTACGTGAATATAGAAATAATGAGTTTGTTGCCCAATTCAACTCTATGTATGGTGTACTGGTAAAGACAACATGTCTTGATCCAATGGAGAGGTCTGCTGCTTCTGCTTATACTAAGGGTGACAAAGGCCTCGCCATGAAGGGTTTCGGGGTAGAAAAGGACGATGAAGACCCTGTTAACTAG 804 0.4216 MFIVGSDTKVQISSNDAVDGHDVENSDTNSNEDVLMYEDVMSLSPKDILKKVFQSEKYAYEFYMRLGKCHRFSVRKGDYAKDEAGNVIRRRFFCNRTGLRDERHYNKLDRKRSHKPETHTNCQALLSTYLDKSMSSWKVRKVTLRHNHELTPRGMVHMIRNFWTISGSSKSHVDGMYAYGSPTSKMFGVHGCHCRSILELVQNLELLVREYRNNEFVAQFNSMYGVLVKTTCLDPMERSAASAYTKGDKGLAMKGFGVEKDDEDPVN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01248 267 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Aip10g01248 267 Coils Coil 194 214 - -
Aip10g01248 267 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 14 177 - -
Aip10g01248 267 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01248 Aip-Chr10 18981960 18984349 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01248 FAR1 7.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01248 - - aip:107633916 247.669